Gene STER_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1705 
SymbolsecA 
ID4437668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1594955 
End bp1597504 
Gene Length2550 bp 
Protein Length849 aa 
Translation table11 
GC content42% 
IMG OID639677295 
Productpreprotein translocase subunit SecA 
Protein accessionYP_821044 
Protein GI116628425 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATA TATTACGCAA AATCATTGAA AATGATAAGG GCGAAATTAA AAAACTAGAA 
AAAACTGCCA AGAAAGTTGA GAGCTATGCT GATGCAATGG CGGCTCTTTC AGATGAAGAA
CTTCAGGCAA AAACAGAAGA ATTTAAACAA CGATATCAAA ACGGAGAAAG TCTAGATCAG
CTCTTGCCGG AGGCATTTGC GGTTGTTCGT GAGGGAGCGA AACGTGTCCT TGGACTTTTC
CCATATCGTG TGCAAATTAT GGGTGGTATT GTGCTTCACT ATGGTGACGT AGCGGAGATG
CGTACAGGGG AAGGGAAAAC CCTTACTGCG ACAATGCCTG TCTACTTGAA TGCTATTTCA
GGTGAAGGTG TACACGTTAT CACCGTTAAC GAATACCTTT CAGAGCGTGA TGCGACTGAA
ATGGGTGAGC TTTATAGTTG GCTCGGTTTG TCAGTAGGGA TCAACCTTTC ATCTAAATCA
CCAGCTGAAA AACGTGAAGC TTATAATTGT GACATCACTT ACTCAACCAG CTCAGAGGTA
GGTTTCGACT ATCTTCGTGA TAATATGGTT GTTCGTAAGG AAAACATGGT ACAACGCCCA
TTGAACTTTG CCTTGGTCGA TGAGGTTGAC TCGGTTCTTA TTGATGAAGC TCGTACACCA
TTGATCGTAT CAGGGCCTGT AAGTTCAGAA ACTAATCAGT TGTATCACCG TGCGGATGCT
TTTGTTAAGA CATTGACTGA AGATGATTAT GCGATTGATA TTCCAACAAA AACAATTGGT
TTGAATGACT CAGGTATTGA CAAGGCTGAA GAGTTCTTCA ACTTGGAAAA TTTGTACGAT
ATTGACAATG TTGCCTTGAC TCACTATATT GACAATGCCC TTCGTGCCAA CTACATTATG
TTGCGTGATA TTGACTACGT GGTAAGTCCT GAGCAAGAAA TCCTTATTGT TGACCAATTT
ACTGGTCGTA CCATGGAAGG TCGTCGTTTT TCAGATGGGC TCCACCAAGC CATTGAGGCT
AAAGAAGGTG TACCAGTCCA AGAGGAAACC AAGACTTCTG CCTCAATCAC TTACCAAAAT
ATGTTCCGTA TGTACAAGAA ATTGTCAGGT ATGACTGGTA CTGGTAAGAC TGAAGAGGAT
GAATTCCGTG AAATCTATAA CATGCGAGTC ATCCCAATTC CAACAAACCG TCCAATTCAA
CGTATTGACC ATGATGACCT TCTGTACTCA ACTTTGGATG CTAAATTCCG TGCTGTGGTA
CAAGATGTTA AGCGTCGTTA TGAGAAGGGG CAACCAGTTC TTATTGGTAC GGTTGCCGTT
GAAACATCTG ACTTGATTTC TAAGATGTTG GTTGACGCAG GTATTCCTCA CGAGGTGCTT
AATGCCAAGA ACCACGAAAA AGAAGCGCAT ATTATCATGA ATGCAGGTCA ACGTGGTGCT
GTTACGATTG CGACCAATAT GGCCGGTCGT GGTACTGACA TCAAACTTGG TGAAGGTGTT
CTGGAGCTTG GTGGACTTTG TGTCATTGGT ACAGAGCGTC ATGAAAGTCG TCGTATCGAC
AACCAGTTGC GTGGTCGTTC GGGACGTCAA GGGGATCCAG GGGAGTCTCA ATTCTACCTA
TCTCTTGAAG ACGAATTGAT GCGTCGTTTC GGTTCTGACC GTATCAAGCA TGTCTTGGAA
CGTTTGAACG CTGATGACGA AGATATTGTT ATCAAATCAC GTATGTTGAC CCGTCAAGTG
GAATCAGCTC AAAAACGTGT CGAAGGGAAT AACTACGATA CTCGTAAACA AGTTCTTCAG
TACGATGACG TTATGCGTGA ACAGCGTGAA ATCATCTACG CTGAGCGTTA TGATGTTATT
ACAGCAGAAC GTGACCTTGA ACCTGAAATC AAGGCTATGA TCAAGCGTAC TATTAACCGT
ACGGTTGATG GACACAGTCG TAACGATCAA GAAGAAGCTC TTAAAGGTAT CTTGAACTTT
GCACGTCAGG CCTTGGTTCC TGAGGATGCC ATCTCGCTTG AAGATCTAAA AGAAGTGGGA
GAGGTGACTA AACGTAGTGT TAATTATGAT GCTATCAAGG TTTATCTGAC TGAGTTAGCA
GATAATGTTT ATGATCGTCA AATTAAGAAA TTGCGTTCAG AGGAGGCTAT TCGCGAATTC
CAAAAAGTCT TGATTTTGAT GGTTGTTGAT AATAAGTGGA CAGACCACAT TGATGCCCTT
GATCAATTAC GTAACGCCGT TGGTATGCGT GGTTATGCGC AAAACAACCC AATCGTTGAG
TATCAATCTG AAAGTTTCAA GATGTTCCAA GATATGATTG GTGCTATTGA GTATGATGTA
ACTCGTACGA TGATGAAAGC ACAAATCCAC GAACAATCTC GTGAACATGT TAATGAACGT
GTTTCAACAA CAGCAACAGG CAATATTCAA GCACATCAAG CAGATGCTAA CGGTCAAGAG
ATTGACTTTA GCAAGGTTGG TCGTAATGAC TTCTGTCCAT GTGGCTCTGG TAAGAAATTC
AAAAATTGTC ACGGTCGTAA ACAGTTTTAG
 
Protein sequence
MANILRKIIE NDKGEIKKLE KTAKKVESYA DAMAALSDEE LQAKTEEFKQ RYQNGESLDQ 
LLPEAFAVVR EGAKRVLGLF PYRVQIMGGI VLHYGDVAEM RTGEGKTLTA TMPVYLNAIS
GEGVHVITVN EYLSERDATE MGELYSWLGL SVGINLSSKS PAEKREAYNC DITYSTSSEV
GFDYLRDNMV VRKENMVQRP LNFALVDEVD SVLIDEARTP LIVSGPVSSE TNQLYHRADA
FVKTLTEDDY AIDIPTKTIG LNDSGIDKAE EFFNLENLYD IDNVALTHYI DNALRANYIM
LRDIDYVVSP EQEILIVDQF TGRTMEGRRF SDGLHQAIEA KEGVPVQEET KTSASITYQN
MFRMYKKLSG MTGTGKTEED EFREIYNMRV IPIPTNRPIQ RIDHDDLLYS TLDAKFRAVV
QDVKRRYEKG QPVLIGTVAV ETSDLISKML VDAGIPHEVL NAKNHEKEAH IIMNAGQRGA
VTIATNMAGR GTDIKLGEGV LELGGLCVIG TERHESRRID NQLRGRSGRQ GDPGESQFYL
SLEDELMRRF GSDRIKHVLE RLNADDEDIV IKSRMLTRQV ESAQKRVEGN NYDTRKQVLQ
YDDVMREQRE IIYAERYDVI TAERDLEPEI KAMIKRTINR TVDGHSRNDQ EEALKGILNF
ARQALVPEDA ISLEDLKEVG EVTKRSVNYD AIKVYLTELA DNVYDRQIKK LRSEEAIREF
QKVLILMVVD NKWTDHIDAL DQLRNAVGMR GYAQNNPIVE YQSESFKMFQ DMIGAIEYDV
TRTMMKAQIH EQSREHVNER VSTTATGNIQ AHQADANGQE IDFSKVGRND FCPCGSGKKF
KNCHGRKQF