| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1657 |
|---|
| Symbol | |
|---|
| ID | 4437718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1545731 |
|---|
| End bp | 1547398 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639677249 |
|---|
| Product | ABC-type multidrug transport system, ATPase and permease component |
|---|
| Protein accession | YP_820998 |
|---|
| Protein GI | 116628379 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTTCGG TTCTCAATCT GATTCCTCCT ATGGTTATGG GTCGGGTCAT TGATGCTATC
ACATCGGGAA AATTGACCAA TCAGATCTTG CTTTTGAATC TCGTTTATTT GCTTTTGGCG
GCTTTAGGAA TGTACTATTT GCGCTATGTT TGGCGGATGT ATATCTTGGC AACGTCTTAT
CGCTTGGGAC AGATTATGCG TTCGCGGCTT TTTGAGCATT TTACCAAGAT GTCGCCTTCT
TTTTACCAAA AGTACCGAAC TGGTGATCTC ATGGCCCATG CCACCAATGA TATCAACTCT
CTAACCCGTT TGGCTGGTGG GGGTGTCATG TCAGCCGTGG ATGCGTCTAT CACAGCCTTG
GTGACTTTAA TCACCATGTT CTTCAGCATT TCCTGGCAGA TGACCCTGGT GGCAGTCTTA
CCTCTACCTT TCATGGCTTT TGCGACTAGT CGTTTGGGAC GTAAGACCCA CAAAGCTTTT
GGAGAATCCC AGGCAGCTTT TTCTGAACTT AATAATAAGG TACAAGAATC GGTGTCAGGT
ATCAAGGTAA CCAAGTCTTT TGGCTATCAG GAGGCTGAGC TCCAGTCCTT CCAAGAGACC
AATAAGATGA CTTTTGAAAA GAATATGCAT ACCATGAAGT ATGACAGCCT TTTTAATCCT
TTGGTCTTGC TCTTTGTTGG CTCATCTTAT GTTTTGACCC TCCTTGTCGG GGCCTTTATG
ATTCAGGCCG GTCAGATAAC GGTCGGAAAT TTGGTAACCT TTATTACCTA TTTGGACATG
CTGGTTTGGC CCCTAATGGC CATTGGCTTC CTCTTTAATA TCACGCAGAG GGGAAATGTG
TCCTACCAAC GTATCGAGAC TCTTTTAGAG CAGGAATCAG ATGTTCAAGA TCCTGCTTAT
CCTCTTCCAA GCATTGAAAA TGGTCGTTTA GACTTTGCGA TTGACCGCTT TGCTTTTGAG
GATGAGGATA CTTTGCGAGA TATTCATTTC ACCTTGGACA AGGGGCAAAC CCTTGGTTTG
GTTGGACCGA CTGGCTCAGG AAAGACGGCT CTTGTCAAGT TGCTCTTGCG GGAGCACGAT
GTCAATCAAG GAGCCATCTA TTTGAATGGA CATGACATCC GAGACTATCG CCTATCAGAC
TTGCGTAGCT TGATTGGTTA TGTTCCTCAA GACCAGTTTC TCTTTGCCAG TTCTATTTTA
GACAATGTCC GCTTTGGTAA TCCAGATTTC TCCATTGATA AGGTGGAAGA AGCGACTAAG
TTAGCTCAAG TTTATGATGA TATCAAGGAT ATGCCTGAAG GCTTTGAAAC AATCATTGGT
GAAAAGGGTG TCAGCCTATC AGGTGGTCAA AAACAACGTC TGGCTATGAG CCGGGCCATG
ATTTTGAATC CAGAAATTTT GATTTTGGAT GACTCCTTAT CTGCGGTTGA TGCTAAGACA
GAACATGCCA TTATTGATAA TCTTAAGCAT ACTCGCAAGG ACAAAACAAC TATTATTACC
GCCCACCGTC TCAGTGCGGT GGTGCACGCT GACCTCATCC TGGTCATGCA AGATGGTCGT
ATCATTGAAC GTGGGCGTCA TGACGACTTA CTAGCTCAAG GTGGTTGGTA TGCCAAGACC
TATGAGTCTC AACAGTTAGA AATGGAAGGA GGAGAAGCTC ATGCCTAA
|
|---|
| Protein sequence | MVSVLNLIPP MVMGRVIDAI TSGKLTNQIL LLNLVYLLLA ALGMYYLRYV WRMYILATSY
RLGQIMRSRL FEHFTKMSPS FYQKYRTGDL MAHATNDINS LTRLAGGGVM SAVDASITAL
VTLITMFFSI SWQMTLVAVL PLPFMAFATS RLGRKTHKAF GESQAAFSEL NNKVQESVSG
IKVTKSFGYQ EAELQSFQET NKMTFEKNMH TMKYDSLFNP LVLLFVGSSY VLTLLVGAFM
IQAGQITVGN LVTFITYLDM LVWPLMAIGF LFNITQRGNV SYQRIETLLE QESDVQDPAY
PLPSIENGRL DFAIDRFAFE DEDTLRDIHF TLDKGQTLGL VGPTGSGKTA LVKLLLREHD
VNQGAIYLNG HDIRDYRLSD LRSLIGYVPQ DQFLFASSIL DNVRFGNPDF SIDKVEEATK
LAQVYDDIKD MPEGFETIIG EKGVSLSGGQ KQRLAMSRAM ILNPEILILD DSLSAVDAKT
EHAIIDNLKH TRKDKTTIIT AHRLSAVVHA DLILVMQDGR IIERGRHDDL LAQGGWYAKT
YESQQLEMEG GEAHA
|
|---|
| |