Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1656 |
Symbol | |
ID | 4437717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1543993 |
End bp | 1545738 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639677248 |
Product | ABC-type multidrug transport system, ATPase and permease component |
Protein accession | YP_820997 |
Protein GI | 116628378 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTAATC AAAACCAATG GTCTGTGTTT AAGCGTCTCT TGACCTATCT CAAGCCTTAC AAGTTCTTGA CCTTTCTAGC TTTGACCTTC CTCTTGTCCA CAACGGTTAT CAAGAGTATC ATTCCCTTGG TGGCCTCTTA TTTTATTGAT CACTATCTTC ATGATATGAA TCAGGCGGCA AGTATGATTC TGATTGGCTA CTATGGTCTC TACCTCTTGC AGACACTAGT CCAGTATCTG GGAAATCTCT TCTTTGCGCG TGTGTCCTAT AGCATTGTCA GAGATATTCG TCGAGATGCC TTTGCCAATA TGGAAAAACT GGGTATGTCT TACTTTGACA AGACCCCAGC AGGTTCCATC GTTTCCCGCT TGACCAATGA TACTGAGACC ATTAGCGAGA TGTTCTCAGG ACCTCTGTCT AGTTTTATTT CGGCTATCTT TATCTTTGTT ACCACCCTTT ACACCATGAT GATCTTGGAC ATTCGTCTGA CCGGGCTTAT TGTCCTCTTT CTTCCTCTGA TCGTCCTTTT GGTTAACCTT TATCGCAAAA AATCAGTGGC CATCATTGAA AAGACCAGAG CCTTGCTTTC AGATATAAAT GCCAAACTGT CAGAGAGTAT CGAAGGGATT CACATCATTC AGGCCTTTAA CCAGGAGAAG CGTCTTAAAA AAGAGTTTGA TGCCATTAAT GAGGAACACC TGATTTATGC CAGCCGTTCT ATATCACTGG ATTCTCTCTT TCTACGCCCA GCCATGAGTC TACTGAAGCT CCTGGCTTAT GCTGTTCTCA TGGCCTATTT TGGCTACCGA GGTATCTATC TGGGTATCAC AGCAGGTACC ATGTATGCCT TTATCCAGTA TATTAATCGC CTCTTTGATC CCTTGATTGA AGTGACACAA AACTTCTCGA CTCTACAAAC CTCTATGGTC TCAGCAGGTC GGGTCTTTGC CTTGATTGAC GAGCGTACCT ATGAGCCTGA ACAGAGAGAC ACAGCTGCCA AGGTTACTGA GGGAAATGTT CGCTTTGAGA ATGTCTCCTT CTCCTATGAT GGCAAGCACC AGATTTTGGA TAATATTTCC TTCTCTGTCA ATAAAGGTGA AACCATCGCC TTTGTGGGAT CTACAGGCTC TGGAAAATCC TCTATTATCA ACGTGCTCAT GCGATTCTAT GAGTTCCAAT CAGGACGAGT TCTCCTAGAC GGTGTGGATA TTCGTGATTA TAGTCAGGCA GAGCTGCGCA AGAATATTGG TCTTGTCCTT CAGGACCCCT TCCTCTATCA TGGCACAATC AAATCCAATA TTGCCATGTA TCAAGATTTA ACTGATGAAG AGATTAAAGC TGCTGCTGAG TTTGTCGATG CCAATCACTT TATTGATAAA CTTCCTGAAG GCTATGATTC CCCAGTTTCC GAACGTGGTT CAAGTTTCTC AACCGGTCAA CGCCAGCTTC TAGCCTTTGC TAGAACCGTT GCTAGCCAGC CTAAAATCTT GATTTTGGAT GAAGCGACAG CCAATATTGA TTCGGAGACA GAGGCTATTG TTCAAAACTC TCTTGCAAAA ATGCGTCAAG GCCGTACAAC CATTGCCATT GCCCACCGCC TATCAACAAT CCAAGATGCT AACTGCATCT ATGTCTTAGA CAAGGGCCGC ATCATTGAAC ACGGTAGCCA CGAAGAGCTC CTAGCCCTCG GCGGCACCTA TCACAAGATG TACAGCCTAC AAGCAGGCGC CATGGAAGGA GAGTAA
|
Protein sequence | MPNQNQWSVF KRLLTYLKPY KFLTFLALTF LLSTTVIKSI IPLVASYFID HYLHDMNQAA SMILIGYYGL YLLQTLVQYL GNLFFARVSY SIVRDIRRDA FANMEKLGMS YFDKTPAGSI VSRLTNDTET ISEMFSGPLS SFISAIFIFV TTLYTMMILD IRLTGLIVLF LPLIVLLVNL YRKKSVAIIE KTRALLSDIN AKLSESIEGI HIIQAFNQEK RLKKEFDAIN EEHLIYASRS ISLDSLFLRP AMSLLKLLAY AVLMAYFGYR GIYLGITAGT MYAFIQYINR LFDPLIEVTQ NFSTLQTSMV SAGRVFALID ERTYEPEQRD TAAKVTEGNV RFENVSFSYD GKHQILDNIS FSVNKGETIA FVGSTGSGKS SIINVLMRFY EFQSGRVLLD GVDIRDYSQA ELRKNIGLVL QDPFLYHGTI KSNIAMYQDL TDEEIKAAAE FVDANHFIDK LPEGYDSPVS ERGSSFSTGQ RQLLAFARTV ASQPKILILD EATANIDSET EAIVQNSLAK MRQGRTTIAI AHRLSTIQDA NCIYVLDKGR IIEHGSHEEL LALGGTYHKM YSLQAGAMEG E
|
| |