Gene STER_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1618 
Symbol 
ID4437757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand- 
Start bp1513546 
End bp1514469 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content44% 
IMG OID639677212 
ProductABC-type amino acid transport system, permease component 
Protein accessionYP_820961 
Protein GI116628342 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000682823 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGA GTATAGAAGC ATTTAATCGG TCACCTTGGT ATCTTCAAGT TATCCTTGGC 
TTGGTTGGTT TGGCAGTAGC TGTTGCTTTA GCCATTCCCT TATCATGGCT AGTGGAAATC 
CTTTGGGGCT ATGTTTTGCA ATTGGTTACA ATTGTCTTCA ACTGGATTTC ATCTTGGATG 
CCAGCTGGTA AGCTCTTCTC ATGGAAGGCT GTCTTCGATG CTGTTCCTAA GATTGTAGAA 
CGCTTGCCTT TAACCTTGGG ATTGACTATT GCAGGTGCCT TCTTCGGTTT GATTTTGGCC 
CTTGTCTTTG CGGTTGTTAA AATTAATCGA GTACGTATCC TTTATCCAAT TCAAGCCGTT 
TTTGTGAGCT TCTTGCGTGG GACACCAATC CTTGTACAAC TCATGTTGAC TTACTATGGT 
ATTCCACTCT TCCTTCGTTA CTTGAATGGT GAGTTCGGCT TAGATTGGAA CATTAATGAG 
ATTCCACCAG CTATCTTCGC TATTACAGCC TTTGCCTTTA ATGAAGCAGC TTACATGAGT 
GAGACCATCC GTGCAGCGAT TCAGGCCGTT GACGCTGGGG AAATCGAAGC TGCCCGTTCT 
CTTGGGATGA CATCAGCACA AGTTTACCGT CGTGTCATCA TTCCAAATGC GGCAGTTATT 
GCGACACCAA GTTTGATTAA CAGTTTGATT GGTTTGACTA AGGGAACATC ACTTGCCTTC 
AGTGCAGGTA TCGTTGAAAT GTATGCGCAA GCTCAAATCT TAGGTGGTGC TGACTACCGT 
TACTTTGAAC GTTATATCTC AGTAGCTCTT GTATACTGGG CAATCTCAAT CTTGATTGAG 
TACATTGGTC GTTCAGTTGA AAATCACATG GCCATTAAGG CGCCTGAAGC GGCTGACATT 
TCTGGCATTG GAGGTGACCG CTAA
 
Protein sequence
MKKSIEAFNR SPWYLQVILG LVGLAVAVAL AIPLSWLVEI LWGYVLQLVT IVFNWISSWM 
PAGKLFSWKA VFDAVPKIVE RLPLTLGLTI AGAFFGLILA LVFAVVKINR VRILYPIQAV 
FVSFLRGTPI LVQLMLTYYG IPLFLRYLNG EFGLDWNINE IPPAIFAITA FAFNEAAYMS 
ETIRAAIQAV DAGEIEAARS LGMTSAQVYR RVIIPNAAVI ATPSLINSLI GLTKGTSLAF 
SAGIVEMYAQ AQILGGADYR YFERYISVAL VYWAISILIE YIGRSVENHM AIKAPEAADI 
SGIGGDR