| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1571 |
|---|
| Symbol | |
|---|
| ID | 4437807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1472993 |
|---|
| End bp | 1474030 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639677168 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_820917 |
|---|
| Protein GI | 116628298 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4473] Predicted ABC-type exoprotein transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCTG AGCTTTTTAA GGAGCGTAGC AGACGATTCA CTACCCGTTG TGCTAAGTAT
AGTCGCTACG TCTTTAATGA CCACTTTATC CTGGTTCTTC TTTTTTTGCT GGGTTTTGTC
TTGGTTCAGT ATAGCCAGTT GCTCCGACAT TTTCCAAAGA ATCCATGGGC CATCATTCTT
GGCTTACTTG TGCTTTGTCT TTTACTTCCT TTTTGGGGTA ATATTGCCAC CTATTTAGAG
CCTGCAGACA AGCACTACCT CTTAGTTAAG GAAGAAGAGG TGCTAGACCA TATTAAGAAG
GCGACAGGGC GTGCTTTTAG ATTTTGGGTA CTCATCCAGA CCTTGATTTT TATCTTGGTC
GTTCCACTCT TTCTGGCCTT GGGTCTTCCA GTTTGGGGAG TTGTCCTTAT AGCCGTGGCT
ATGGCTATTC TTAAGTATTT TATTTTCCAA AAGAAAGCAC AACCTTTTTA TAAGCAGTCT
GGATTGAATT GGACTGATGC TATTGCAGCG GAGAATAAAC GACAACAATC AATCTTGAAG
TTTTTCTCAC TCTTTACCAA TGTTAAGGGA ATTACATCGA GTGTTAAACG CCGTGGCTAT
TTGGATGGCA TTCTCAAGCG TACAAAGAAA GACAAGAAAT ATACGTGGTA CAACCTGTAC
CTAAGAGCCT TCTTACGTTC AGGAGATTAC GTTGCCCTTA GCCTACGCCT TTTTGCTTTA
ACACTTTTGG TTATTTTTTT GGTTCCTGAA AAATGGCTGG CTATGGTACT TGTGGTTGTT
TTTGACTATC TCTTACTCTT CCAGCTCACA GCGCTTAAAT CGCACTTTGC TTACCAAAGG
ATGGCCAACC TTATGCCAAT TGGAAAAGAC ATGCAGGTGA GCAATCTTAA GCGCTTGATT
AATCAAATTG TCCTTGTAAT GACACTGATT CAGGCTCTTT GTCTCTTTGA CCTTAAATTT
AGCCTGATTT TGATTGGAGT TATGCTAGTT TTGAGTCTTG TTTACCTACC AGCCAAGCTT
AAGAAGATGA TTGACTAA
|
|---|
| Protein sequence | MIAELFKERS RRFTTRCAKY SRYVFNDHFI LVLLFLLGFV LVQYSQLLRH FPKNPWAIIL
GLLVLCLLLP FWGNIATYLE PADKHYLLVK EEEVLDHIKK ATGRAFRFWV LIQTLIFILV
VPLFLALGLP VWGVVLIAVA MAILKYFIFQ KKAQPFYKQS GLNWTDAIAA ENKRQQSILK
FFSLFTNVKG ITSSVKRRGY LDGILKRTKK DKKYTWYNLY LRAFLRSGDY VALSLRLFAL
TLLVIFLVPE KWLAMVLVVV FDYLLLFQLT ALKSHFAYQR MANLMPIGKD MQVSNLKRLI
NQIVLVMTLI QALCLFDLKF SLILIGVMLV LSLVYLPAKL KKMID
|
|---|
| |