| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1558 |
|---|
| Symbol | |
|---|
| ID | 4437832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1460974 |
|---|
| End bp | 1463334 |
|---|
| Gene Length | 2361 bp |
|---|
| Protein Length | 786 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639677156 |
|---|
| Product | cation transport ATPase |
|---|
| Protein accession | YP_820906 |
|---|
| Protein GI | 116628287 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG TGAAAAAACA GTTACAAGGC TTGACTCAGG TGGAGGTCAA GCAGCGGATA
GATGACGGTA AAACAAATTA TTTTAAAGCA AAAGCTGGCT CCAGCAATTG GGATATTTTT
AGGCGTAATG TCTTTAACTC CTTTAATATG CTTAATTTTG CAATCTTTGT GGCCTTGATT
GCTGTTCAGG CTTGGTCTAA TCTATTTTTC TTCGGGATTA TTGTGCTTAA TGCCTTTACA
GGGATGATGA CGGAGTTGCG TGCCCGTCGC ATGGTTGATA AGCTCAATCT CATGAATCAG
GATCAGATTC GTGTGGTGCG TGATGGACAG CTTGTTTCCA TCGATCCTAA GGATATTGTC
TTAGATGATA TCATGCTCTT GTCTGCGGGT GAGCAGGTTC CCAGTGATGC AGTGGTTGTT
GATGGAATGG CTGAGCTTAA CGAGGCTATG CTGACTGGTG AGAGTGATCA GATTCTAAAG
AAAGATGGGA AGGAGTTGCT CTCAGGTTCT TATCTTGTGA GTGGTCAGGT CTATGCTAAG
GTCATTAACG TAGCCGAGGA CAATTACGCC AACAAGCTTA TGTTAGAGGC CAAGACTCAT
AAGCCAATCG TGTCCTGTAT CCTTTATAAC ATGGACAAGA TTGCTAAGTT TACGGGAAAG
ATTGTTATAC CATTTGGGCT TGCACTCTTT TTCGAGGCTT ACATGATTAA GCAGCTTTCT
CTTCAAGAGT CGGTCGTTAC CAGTTCAACA GCCCTTCTGG GAATGTTGCC TAAGGGAATT
ACCCTTTTGA CTATTACATC ACTTTTGACG GCTGTCATTA AGCTTGGGAT GAAACACATC
CTTGTGCAAG AGATGTACTC TGTTGAAACC TTGGCCCGTG TAGATGTGCT TTGTTTAGAT
AAGACAGGGA CGATTACACA AGGAAAGATG ACAGTTAAAG GTCTAGAGCT ACTGTCAGAG
CGTTTTACGA AAGAGGAGTT GGAGCGTTTG CTTGCGGCTT ATATGCAACA TAGTAAGGAT
AAAAACGCAA CAGCTCAGGC TATTCGAAAT GCTTATGAGG GTCTGGAACA TCATTATCAG
GTAGGTGATG TTATTCCATT TTCAAGCAAT CGTAAATGGG GTGCTGTGAG CATCAATGGG
CTTGGAACTC TCTTTTTGGG AGCACCTGAG ATGCTTCTTA AGAAGAATCC TAAAGCAGTC
GATAAGGCTC AGGCGCGAGG GTCTCGTGTT TTGATTTTGG CTTGGAGTCA GTCAGGTATT
GCCACAGAGA ACATGATTTT GCCGAATGAT ATCGAGGCTT TGACCTTGCT TGAAATTGCC
GATCCTATTC GTGAGGATGC TGCAGAAACT CTGGAATACC TGCGTTCAGA AGATGTGACA
CTTAAGATTA TTTCTGGTGA CAATCCAGTG ACGGTTTCTC ATATTGCTCA TCAAGCTGGT
TTTGCCGATT ATCAAAGCTA TATTGACTGT TCTAAGATCA GCGATGAGGA ATTGGAGGCT
TTGGCTGAGG ATACTGCGAT TTTTGGTCGT GTATCTCCGC ATCAGAAAAA GTTATTAATC
CAAACCCTTA ATGCCAATGG GCATACCACG GCTATGACTG GTGACGGTGT CAATGATATC
TTGGCACTGC GTGAGGCGGA TTGTTCGATT GTTATGGCAG AGGGAGATCC GGCTACACGC
CAGATTGCTA ACTTGGTGCT AATGGATTCT GAGTTTAAGG ACATTCCTGA AATTCTATTT
GAGGGACGCC GTGTGGTTAA TAATATTGCC CACATTGCAC CTATTTTCCT CATTAAAACT
GTTTATTCCT TCCTTTTGGG GCTTATCTGT ATTGGCAGTA TTGTTTTTGG AAAGGCGGAG
TACCTCTTGG TCTTTCCATT CATTCAGGTT CAGATGACCT TGACAGGTCA GTTTATCGAG
GGCCTTCCAC CATTTGTTTT GACCTTCGAA CGTAATATTC GTCCTGTTGA GAAACATTTC
CTCAGACGTT CGCTTCAGTT GGCTATTCCT AATGCCTTGA TGCTGGTTAT CAGTGTTCTT
ATTTTCCATC TGTCTCAGGT CTATCTTGGT ATGAGTAGTA CAGACATGCT GACGCTTTCT
TATTATATGA TGGGATCAAC GGGTGTTCTT GCCGTTATTC GTGCTTGTAT CCCCTTAAAT
ATGGGGCGTG TGGCCTTGAT TATCTACTCA GTCTTTGGCT TCTTAATCAG TTCCTACTAT
CTTCGAGATG TGATTGCAAT CTCAACACTT AATAGCTACA CATTGCCAAT CTATCTGGTC
GCAATGGCTA TCTGTACACC GCTTTTCTTC TGGATTAGCT ATAAACAAGG TGCTTTCCAA
AAAGCACAAA GCAAAACTTA A
|
|---|
| Protein sequence | MKFVKKQLQG LTQVEVKQRI DDGKTNYFKA KAGSSNWDIF RRNVFNSFNM LNFAIFVALI
AVQAWSNLFF FGIIVLNAFT GMMTELRARR MVDKLNLMNQ DQIRVVRDGQ LVSIDPKDIV
LDDIMLLSAG EQVPSDAVVV DGMAELNEAM LTGESDQILK KDGKELLSGS YLVSGQVYAK
VINVAEDNYA NKLMLEAKTH KPIVSCILYN MDKIAKFTGK IVIPFGLALF FEAYMIKQLS
LQESVVTSST ALLGMLPKGI TLLTITSLLT AVIKLGMKHI LVQEMYSVET LARVDVLCLD
KTGTITQGKM TVKGLELLSE RFTKEELERL LAAYMQHSKD KNATAQAIRN AYEGLEHHYQ
VGDVIPFSSN RKWGAVSING LGTLFLGAPE MLLKKNPKAV DKAQARGSRV LILAWSQSGI
ATENMILPND IEALTLLEIA DPIREDAAET LEYLRSEDVT LKIISGDNPV TVSHIAHQAG
FADYQSYIDC SKISDEELEA LAEDTAIFGR VSPHQKKLLI QTLNANGHTT AMTGDGVNDI
LALREADCSI VMAEGDPATR QIANLVLMDS EFKDIPEILF EGRRVVNNIA HIAPIFLIKT
VYSFLLGLIC IGSIVFGKAE YLLVFPFIQV QMTLTGQFIE GLPPFVLTFE RNIRPVEKHF
LRRSLQLAIP NALMLVISVL IFHLSQVYLG MSSTDMLTLS YYMMGSTGVL AVIRACIPLN
MGRVALIIYS VFGFLISSYY LRDVIAISTL NSYTLPIYLV AMAICTPLFF WISYKQGAFQ
KAQSKT
|
|---|
| |