| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1540 |
|---|
| Symbol | |
|---|
| ID | 4437853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1443599 |
|---|
| End bp | 1444357 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639677138 |
|---|
| Product | ABC-type polar amino acid transport system, ATPase component |
|---|
| Protein accession | YP_820888 |
|---|
| Protein GI | 116628269 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00340374 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA GCATTTTACA AATCAAGGAT TTGAAAAAGT CCTTTGGGGA CAATCAAATT
CTCAAAGGCA TCTCCTTAGA TGTTAAGCAA GGTGAAGTCG TTGTTATCCT GGGTTCCTCA
GGTTGTGGAA AATCGACTTT GCTACGCTGC ATCAATGGCT TAGAGACTAT CCAAGGAGGC
GATATTCTCC TAGATGGTAA GTCTATCACT GGTAGTAAAA AGGATTTCCA CCTGATTCGT
CAGAAAATCG GAATGGTCTT TCAAAGCTAT GACCTCTTCC CGCATTTGGA TATCCTGCAA
AACCTGATTT TGGGGCCAGT CAAAGCTCAA GGGCGTAACA AGAATGAAGT CATTGCAGAG
GCTGAGAAAC TCTTGGACCG TGTGGGACTT TTGGATAAGA AACACAGCTT TGCGCGACAA
CTATCAGGTG GTCAAAAGCA ACGGGTAGCC ATAGTCCGTT CCCTGCTCAT GCATCCTGAA
GTTATCCTCT TTGATGAAGT GACGGCTTCA CTTGATCCTG AGATGGTTCG TGAGGTTCTG
GAATTAATCA ATGACCTGGC TCAAGAAGGA TGTACCATGT TGATTGTAAC CCATGAACTT
CAGTTTGCGC GTGCCATCGC TGACCGTATT ATCTTTATGG ATAAGGGTGT CATCGCTGAG
GAAGGTACTG CTGAAGAATT CTTCAATCAT CCAAAGACAC AGCGGGCTCA AGAGTTCCTC
AATGTCTTTG ATTTCAGTCA GTTTGGTGCC TATTTGTAA
|
|---|
| Protein sequence | MTESILQIKD LKKSFGDNQI LKGISLDVKQ GEVVVILGSS GCGKSTLLRC INGLETIQGG
DILLDGKSIT GSKKDFHLIR QKIGMVFQSY DLFPHLDILQ NLILGPVKAQ GRNKNEVIAE
AEKLLDRVGL LDKKHSFARQ LSGGQKQRVA IVRSLLMHPE VILFDEVTAS LDPEMVREVL
ELINDLAQEG CTMLIVTHEL QFARAIADRI IFMDKGVIAE EGTAEEFFNH PKTQRAQEFL
NVFDFSQFGA YL
|
|---|
| |