| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1521 |
|---|
| Symbol | |
|---|
| ID | 4437873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1426025 |
|---|
| End bp | 1426720 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639677120 |
|---|
| Product | late competence protein required for DNA binding and uptake |
|---|
| Protein accession | YP_820870 |
|---|
| Protein GI | 116628251 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGAAA AGATTCTAGC CTATGTCAAA GATAATCGTC TGTTTGTGAG TGTCATCGCT
GTACTGATGG TGATTTTTTG CTTCTTTTTA TGGATGACTT GTGGTGCCGG CAACAGCATG
GAGGCGGAGA CGTCTTATAC AGATGTGACA GCTTTGTCAA CGTCTTCATC CAAACAAAGT
TCACAGTCTC TTTCTGAGGC GTCTTCCCAG TCAAAGACCG AAGGAAGTGA AAAAGTTAAG
TCAAAAGTAA CGGTAGATGT TAAGGGGGCT GTGGTCAATC CAGGTGTCTA TACGCTAAAG
GCAGGCGCTA GGGTGACAGA TGTCATTCAG GAAGCTGGAG GAATGACAGA AGATGCAGAC
GCTAAGAGTG TTAACTTAGC CGCAAGCTTG TCAGATGAAG AGGTTATTTA TGTAGCCAAT
AAAGATGAAA ATGTTTCTGT CCTTGATCAA ACAGGTACTG GTCAGGTCTC TGACAAAGGA
GGGCAGGCTG TATCTAAGGA TGGCAAAATT AACTTAAATA CAGCGACCTC AGAGCAGTTG
CAAACCATTT CTGGAATTGG AGCTAAGCGG GCAGAGGATG TCATTGCCTA TCGTGAAAGT
CATGGCGGCT TTCAGTCCGT AGATGACTTG AAAAATGTCT CAGGAATTGG TGATAAAACA
TTAGATAAAA TCAGAGAGTC CCTCTATGTG GCTTAA
|
|---|
| Protein sequence | MKEKILAYVK DNRLFVSVIA VLMVIFCFFL WMTCGAGNSM EAETSYTDVT ALSTSSSKQS
SQSLSEASSQ SKTEGSEKVK SKVTVDVKGA VVNPGVYTLK AGARVTDVIQ EAGGMTEDAD
AKSVNLAASL SDEEVIYVAN KDENVSVLDQ TGTGQVSDKG GQAVSKDGKI NLNTATSEQL
QTISGIGAKR AEDVIAYRES HGGFQSVDDL KNVSGIGDKT LDKIRESLYV A
|
|---|
| |