| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1500 |
|---|
| Symbol | |
|---|
| ID | 4437890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 1403400 |
|---|
| End bp | 1404851 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639677101 |
|---|
| Product | cytoplasmic alpha-amylase |
|---|
| Protein accession | YP_820851 |
|---|
| Protein GI | 116628232 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.132711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATC AAACTGCAAT GCAATACTTT GAATGGTATC TCCCAAGTGA CGGCCAGCAT
TGGAACAACT TAGCTGAAGA TGCCCAACAT CTAGCAGACC TTGGCATCAG CCATGTTTGG
ATGCCACCTG CTTTCAAAGC TACTAACAAA GATGATGTTG GTTACGGAGT CTATGACCTC
TTTGACCTTG GGGAATTCGA CCAAAAAGGA ACCATACGCA CCAAATATGG TCTCAAGGAA
GAATACCTTA ATGCCATCAA CCAACTCAAA AATGTTGGTA TCATCCCTAT GGCCGATGTT
GTGCTCAACC ACAAGGCAGC CGCGGATAAA CTTGAAACCT TTTATGTGGT AGAAGTTGAC
CCTGAGGACC GTACCAAAGT AATCAGCGAA CCGTTTGAAA TCGAGGGTTG GACTCATTTC
ACTTTTGACG GACGTCAGAA AGCTTACAAC GACTTTGAAT GGCACTGGTA CCACTTTAAT
GGGACTGACT TCGATGCCAA AAGAAATAAA AAAGGTATCT ATCTTATCCA AGGTGACAAC
AAAGGCTGGG CACATAATGA CTTGGTTGAC AATGAAAATG GTAACTTTGA CTACCTTATG
TTTGCCAACC TAGATTATAG GCATCCTGAA GTTATAGAAA ATATTTACGA ATGGGCTGAC
TGGTTCGTCG AAACAACTGG TGTCCAAGGT TTCCGAATGG ATGCCATCAA GCACATTGAT
TATTTCTTTA TGCGTAATTT TATTCGCGAC GTCAAAGAAA AACAAGGTCA AGATTTCTAT
GTTTTTGGTG AATTTTGGAA TGCCAAGGAA GAGGATAATA ATACTTATCT CGAAAAAACT
GAAAACCGCT TTGATCTTGT GGATGTTCGC CTTCATTACA ATTTATATGA TGCCAGCCTC
AAAGGAGCAG ATTACGATTT GACGACTATT TTCGAACAAA CATTGGTCAA AAATCACCCT
GAGCATGCGG TAACCTTCGT AGAGAACCAT GACACCCAAC GTGGACAAGC ATTGGAATCT
ACTGTTGAAG AATGGTTTAA ACCATCTGCC TATGCCCTCA TCCTTCTTCG TAAAGACGGC
CTTCCTTGCC TATTTTATGG TGACTACTAT GGCATTGATG GTGAGTTTGC TCAAGAAAGT
TTCAAAGAGG TCCTAGACAC CTTACTTTAC GCTCGTAAAG ATTTGGCTTA TGGAGAGCAA
ACAGACTACT TTGACGACCC TAACTGTATT GGATGGACAC GCTCTGGTAA TGAAGACTGT
ACTCCATTAG CCGTAACCAT TTCTAATGAT GCTGCCAACA ACAAATCTAT GGAAATTGGA
AGTGACTGGG CTGGACAAAC TTTCTATGAT ATTCTTGGAA ACTGCTCTGA TACTGTAACA
ATTGACGAAG ACGGGTGGGG AGACTTCCCA GTCTCTGAAA AATCTGTCAG CGTTTGGACA
ATTCAAGACT AA
|
|---|
| Protein sequence | MTNQTAMQYF EWYLPSDGQH WNNLAEDAQH LADLGISHVW MPPAFKATNK DDVGYGVYDL
FDLGEFDQKG TIRTKYGLKE EYLNAINQLK NVGIIPMADV VLNHKAAADK LETFYVVEVD
PEDRTKVISE PFEIEGWTHF TFDGRQKAYN DFEWHWYHFN GTDFDAKRNK KGIYLIQGDN
KGWAHNDLVD NENGNFDYLM FANLDYRHPE VIENIYEWAD WFVETTGVQG FRMDAIKHID
YFFMRNFIRD VKEKQGQDFY VFGEFWNAKE EDNNTYLEKT ENRFDLVDVR LHYNLYDASL
KGADYDLTTI FEQTLVKNHP EHAVTFVENH DTQRGQALES TVEEWFKPSA YALILLRKDG
LPCLFYGDYY GIDGEFAQES FKEVLDTLLY ARKDLAYGEQ TDYFDDPNCI GWTRSGNEDC
TPLAVTISND AANNKSMEIG SDWAGQTFYD ILGNCSDTVT IDEDGWGDFP VSEKSVSVWT
IQD
|
|---|
| |