Gene STER_1480 details

Gene Information

• Locus tag: STER_1480
• Symbol: gyrB
• ID: 4437926
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: -
• Start bp: 1387053
• End bp: 1389005
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 639677084
• Product: DNA gyrase subunit B
• Protein accession: YP_820835
• Protein GI: 116628216
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.515184
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATG AATTAAAAAA TCTTGAAGAA AAAGCGCAAG AATATGATGC CAGCCAGATT 
CAGGTCTTAG AGGGACTTGA AGCGGTACGT ATGCGCCCAG GAATGTATAT TGGATCGACC 
TCCAAAGAAG GCTTGCATCA CTTGGTATGG GAGATTGTCG ATAACTCAAT TGATGAGGCC 
TTAGCAGGCT TCGCCTCGCA TATCAAAGTT TTTATTGAAC CGGATAATTC TATCACGGTT 
GTTGATGATG GTCGTGGTAT CCCAGTCGAT ATTCAAGAAA AAACAGGTCG TCCTGCTGTT 
GAGACAGTAT TTACAGTTCT TCATGCTGGT GGTAAATTCG GTGGAGGCGG TTATAAGGTC 
TCTGGTGGTT TGCACGGGGT TGGTTCTTCG GTCGTTAATG CCCTCTCAAC TCAGCTTGAT 
GTTAAGGTTT ATAAAAACGG TCATATTCAC TTCCAAGAGT ATAAACGAGG AGTTGTGGTA 
GACGACTTAA GGATTATTGG TGAAACTGAA GAACATGGAA CGACTGTTCA CTTTATTCCA 
GATCCAGAAA TTTTCCAAGA AACGACGGAG TTTGACTTTG GAAAGTTAGC TAAACGTTTC 
CAAGAGCTAG CTTTTCTGAA CAAGGGTCTA CGTATCTCTA TTATAGATAA GCGTGAAGGT 
CTTGAACAAG AGAAACATTA TCACTATGAG GGTGGAATCA CATCTTATGT GAAGTACATC 
AATGAAAACA AAGACGTTAT CTTTGATGAG CCTATCTACA CATATGGTGA GATGGATGGC 
ATTTCAGTCG AAGTTGCTAT GCAGTATACG ACCGGCTACC ATGAAACGGT GATGAGTTTT 
GCCAATAATA TCCACACTCA TGAAGGTGGT ACTCATGAAC AAGGTTTCCG TACGGCTCTT 
ACTCGTGTTA TCAATGATTA TGCACGTCAG AATAAGATTC TCAAAGAAAA AGATGATAAT 
CTGACTGGTG ATGATGTTCG TGAAGGCTTG ACTGCTATCA TCTCTGTCAA GCATCCCAAC 
CCACAGTTTG AAGGGCAAAC CAAGACCAAA CTTGGAAACT CAGAAGTGGT TAAGATTACT 
AATCGTCTCT TCAGTGAAGC CTTAAGTCGC TTCCTCTTGG AAAATCCTGC TATTGCTAAA 
AAGATTGTTG AAAAAGGAAT TCTGGCTTCT AAGGCCCGTA TCGCTGCTAA GCGTGCTCGT 
GAGGTGACAC GTAAGAAGTC AGGTCTTGAA ATTTCAAACC TTCCAGGTAA GTTGGCAGAT 
TGTTCGTCAA ACAATCCCGA AATGAATGAG CTCTTCATTG TCGAAGGGGA CTCAGCCGGT 
GGTTCTGCTA AATCGGGTCG TAATCGTGAA TTCCAAGCTA TCTTGCCAAT TCGTGGTAAA 
ATTTTGAACG TTGAGAAGGC TAGCATGGAT AAGATTCTAG CCAACGAAGA GATTCGTTCT 
CTTTTCACAG CTATGGGAAC CGGTTTTGGA TCAGAATTTG ATGTCAGCAA AGCTCGCTAT 
CACAAGTTGG TTATCATGAC CGATGCCGAT GTTGATGGGG CTCACATTCG TACCTTGCTC 
TTGACCTTGA TTTATCGCTT TATGCATCCA GTTTTGGAAG CTGGCTATGT CTACATTGCA 
CAACCACCAA TTTATGGTGT TAAGGTTGGT TCTGAGATTA AAGAGTATAT CCAGCCAGGT 
GCGGATCAAG AAGAAAAATT GCGTGCTGCT CTTGAAAACT ACAGTGTAGG GCGTTCAAAA 
CCTACGGTAC AACGTTATAA AGGCTTAGGT GAAATGGATG ACCACCAACT TTGGGAAACT 
ACCATGGACC CTGAAAATCG TTTATTGGCA CGTGTTTCTG TGGATGATGC TGCAGAGGCC 
GATAAGATTT TTGATATGCT GATGGGAGAT AAGGTTGAAC CTCGCCGCGA ATTTATCGAA 
GAAAATGCCG TTTACAGTAC TCTGGATATC TAA 

 

Protein sequence

MTDELKNLEE KAQEYDASQI QVLEGLEAVR MRPGMYIGST SKEGLHHLVW EIVDNSIDEA 
LAGFASHIKV FIEPDNSITV VDDGRGIPVD IQEKTGRPAV ETVFTVLHAG GKFGGGGYKV 
SGGLHGVGSS VVNALSTQLD VKVYKNGHIH FQEYKRGVVV DDLRIIGETE EHGTTVHFIP 
DPEIFQETTE FDFGKLAKRF QELAFLNKGL RISIIDKREG LEQEKHYHYE GGITSYVKYI 
NENKDVIFDE PIYTYGEMDG ISVEVAMQYT TGYHETVMSF ANNIHTHEGG THEQGFRTAL 
TRVINDYARQ NKILKEKDDN LTGDDVREGL TAIISVKHPN PQFEGQTKTK LGNSEVVKIT 
NRLFSEALSR FLLENPAIAK KIVEKGILAS KARIAAKRAR EVTRKKSGLE ISNLPGKLAD 
CSSNNPEMNE LFIVEGDSAG GSAKSGRNRE FQAILPIRGK ILNVEKASMD KILANEEIRS 
LFTAMGTGFG SEFDVSKARY HKLVIMTDAD VDGAHIRTLL LTLIYRFMHP VLEAGYVYIA 
QPPIYGVKVG SEIKEYIQPG ADQEEKLRAA LENYSVGRSK PTVQRYKGLG EMDDHQLWET 
TMDPENRLLA RVSVDDAAEA DKIFDMLMGD KVEPRREFIE ENAVYSTLDI