| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1477 |
|---|
| Symbol | |
|---|
| ID | 4437923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1379975 |
|---|
| End bp | 1384141 |
|---|
| Gene Length | 4167 bp |
|---|
| Protein Length | 1388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 639677081 |
|---|
| Product | CRISPR-system-like protein |
|---|
| Protein accession | YP_820832 |
|---|
| Protein GI | 116628213 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3513] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01865] CRISPR-associated protein, Csn1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGC CATACTCAAT TGGACTTGAT ATTGGAACGA ATAGTGTTGG ATGGGCTGTA
ACAACTGATA ATTACAAGGT TCCGTCTAAA AAAATGAAAG TCTTAGGAAA TACGAGTAAA
AAGTATATCA AAAAGAACCT GTTAGGTGTA TTACTCTTTG ACTCTGGAAT CACAGCAGAA
GGAAGAAGAT TGAAGCGTAC TGCAAGAAGA CGTTATACTA GACGCCGTAA TCGTATCCTT
TATTTGCAGG AAATTTTTAG CACAGAGATG GCTACATTAG ATGATGCTTT CTTTCAAAGA
CTTGACGATT CGTTTTTAGT TCCTGATGAT AAACGTGATA GTAAGTATCC GATATTTGGA
AACTTAGTAG AAGAAAAAGC CTATCATGAT GAATTTCCAA CTATCTATCA TTTAAGGAAA
TATTTAGCAG ATAGTACTAA AAAAGCAGAT TTGCGTCTAG TTTATCTTGC ATTGGCTCAT
ATGATTAAAT ATAGAGGTCA CTTCTTAATT GAAGGAGAGT TTAATTCAAA AAATAATGAT
ATTCAGAAGA ATTTTCAAGA CTTTTTGGAC ACTTATAATG CTATTTTTGA ATCGGATTTA
TCACTTGAGA ATAGTAAACA ACTTGAGGAA ATTGTTAAAG ATAAGATTAG TAAATTAGAA
AAGAAAGATC GTATTTTAAA ACTCTTCCCT GGGGAGAAGA ATTCGGGGAT TTTTTCAGAG
TTTCTAAAGT TGATTGTAGG AAATCAAGCT GATTTTAGGA AATGTTTTAA TTTAGACGAA
AAAGCCTCCT TACATTTTTC CAAAGAAAGC TATGATGAAG ATTTAGAGAC TTTGTTAGGT
TATATTGGAG ATGATTACAG TGATGTCTTT CTCAAAGCAA AGAAACTTTA TGATGCTATT
CTTTTATCGG GTTTTCTGAC TGTAACTGAT AATGAGACAG AAGCACCTCT CTCTTCTGCT
ATGATAAAGC GATATAATGA ACACAAAGAA GATTTAGCGT TACTAAAGGA ATATATAAGA
AATATTTCAC TAAAAACGTA TAATGAAGTA TTTAAAGATG ACACCAAAAA TGGTTATGCT
GGTTATATTG ATGGAAAAAC AAATCAGGAA GATTTCTACG TATATCTAAA AAAACTATTG
GCTGAATTTG AAGGTGCGGA TTATTTTCTT GAAAAAATTG ATCGAGAAGA TTTTTTGAGA
AAGCAACGTA CATTTGACAA TGGTTCGATA CCATATCAGA TTCATCTTCA AGAAATGAGA
GCAATTCTTG ATAAGCAAGC TAAATTTTAT CCTTTCTTGG CTAAAAATAA AGAAAGAATC
GAGAAGATTT TAACCTTCCG AATTCCTTAT TATGTAGGTC CACTTGCGAG AGGGAATAGT
GATTTTGCCT GGTCAATAAG AAAACGAAAT GAAAAAATTA CACCTTGGAA TTTTGAGGAC
GTTATTGACA AAGAATCTTC GGCAGAGGCC TTCATTAATC GAATGACTAG TTTTGATTTG
TATTTGCCAG AAGAGAAGGT ACTTCCAAAG CATAGTCTCT TATACGAAAC TTTTAATGTA
TATAATGAAT TAACAAAAGT TAGATTTATT GCCGAAAGTA TGAGAGATTA TCAATTTTTA
GATAGTAAGC AGAAGAAAGA TATTGTTAGA CTTTATTTTA AAGATAAAAG GAAAGTTACT
GATAAGGATA TTATTGAATA TTTACATGCA ATTTATGGGT ATGATGGAAT TGAATTAAAA
GGCATAGAGA AACAGTTTAA TTCTAGTTTA TCTACTTATC ACGATCTTTT AAATATTATT
AATGATAAAG AGTTTTTGGA TGATAGTTCA AATGAAGCGA TTATCGAAGA AATTATCCAT
ACTTTGACAA TTTTTGAAGA TAGAGAGATG ATAAAACAAC GTCTTTCAAA ATTTGAGAAT
ATATTCGATA AATCCGTTTT GAAAAAGTTA TCTCGTAGAC ATTACACTGG CTGGGGTAAG
TTATCTGCTA AGCTTATTAA TGGTATTCGA GATGAAAAAT CTGGTAATAC TATTCTTGAT
TACTTAATTG ATGATGGTAT TTCTAACCGT AATTTCATGC AACTTATTCA CGATGATGCT
CTTTCTTTTA AAAAGAAGAT ACAGAAAGCA CAAATTATTG GTGACGAAGA TAAAGGTAAT
ATTAAAGAGG TCGTTAAGTC TTTGCCAGGT AGTCCTGCGA TTAAAAAAGG TATTTTACAA
AGCATAAAAA TTGTAGATGA ATTGGTCAAA GTAATGGGAG GAAGAAAACC CGAGTCAATT
GTTGTTGAGA TGGCTCGTGA AAATCAATAT ACCAATCAAG GTAAGTCTAA TTCCCAACAA
CGCTTGAAAC GTTTAGAAAA ATCTCTCAAA GAGTTAGGTA GTAAGATACT TAAGGAAAAT
ATTCCTGCAA AACTTTCTAA AATAGACAAT AACGCACTTC AAAATGATCG ACTTTACTTA
TACTATCTTC AAAATGGAAA AGATATGTAT ACCGGAGATG ATTTAGATAT TGATAGATTA
AGTAATTATG ATATTGATCA TATTATTCCT CAAGCTTTTT TGAAAGATAA TTCTATTGAC
AATAAAGTAC TTGTTTCATC TGCTAGTAAC CGTGGTAAAT CAGATGATGT TCCAAGTTTA
GAGGTTGTCA AAAAAAGAAA GACATTTTGG TATCAATTAT TGAAATCAAA ATTAATTTCT
CAACGAAAAT TTGATAATCT GACAAAAGCT GAACGGGGAG GATTGTCACC TGAGGACAAA
GCTGGTTTTA TTCAACGCCA GTTGGTTGAA ACACGTCAAA TAACAAAACA TGTAGCTCGT
TTACTTGATG AGAAATTTAA TAATAAAAAA GATGAAAATA ATAGAGCGGT ACGAACAGTA
AAAATTATTA CCTTGAAATC TACCTTAGTT TCTCAATTTC GTAAGGATTT TGAACTTTAT
AAAGTTCGTG AAATCAATGA TTTTCATCAT GCTCATGATG CTTACTTGAA TGCCGTTGTA
GCAAGTGCTT TACTTAAGAA ATACCCTAAA CTAGAGCCAG AATTTGTGTA CGGTGATTAT
CCAAAATACA ATAGTTTTAG AGAAAGAAAG TCCGCTACAG AAAAGGTATA TTTCTATTCA
AATATCATGA ATATCTTTAA AAAATCTATT TCTTTAGCTG ATGGTAGAGT TATTGAAAGA
CCACTTATTG AGGTAAATGA GGAGACCGGC GAATCCGTTT GGAATAAAGA ATCTGATTTA
GCAACTGTAA GGAGAGTACT CTCTTATCCG CAAGTAAATG TTGTGAAAAA AGTTGAGGAA
CAGAATCACG GATTGGATAG AGGAAAACCA AAGGGATTGT TTAATGCAAA TCTTTCCTCA
AAGCCAAAAC CAAATAGTAA TGAAAATTTA GTAGGTGCTA AAGAGTATCT TGACCCCAAA
AAGTATGGGG GGTATGCTGG AATTTCTAAT TCTTTTACTG TTCTTGTTAA AGGGACAATT
GAAAAAGGTG CTAAGAAAAA AATAACAAAT GTACTAGAAT TTCAAGGTAT TTCTATTTTA
GATAGGATTA ATTATAGAAA AGATAAACTT AATTTTTTAC TTGAAAAAGG TTATAAAGAT
ATTGAGTTAA TTATTGAACT ACCTAAATAT AGTTTATTTG AACTTTCAGA TGGTTCACGT
CGTATGTTGG CTAGTATTTT GTCAACGAAT AATAAGAGGG GAGAGATTCA CAAAGGAAAT
CAGATTTTTC TTTCACAGAA GTTTGTGAAA TTACTTTATC ATGCTAAGAG AATAAGTAAC
ACAATTAATG AGAATCATAG AAAATATGTT GAGAACCATA AAAAAGAGTT TGAAGAATTA
TTTTACTACA TTCTTGAGTT TAATGAGAAT TATGTTGGAG CTAAAAAGAA TGGTAAACTC
TTAAACTCTG CCTTTCAATC TTGGCAAAAT CATAGTATAG ATGAACTCTG TAGTAGTTTT
ATAGGACCTA CCGGAAGTGA AAGAAAGGGG CTATTTGAAT TAACCTCTCG TGGAAGTGCT
GCTGATTTTG AATTTTTAGG TGTTAAAATT CCAAGGTATA GAGACTATAC CCCATCATCC
CTATTAAAAG ATGCCACACT TATTCATCAA TCTGTTACAG GCCTCTATGA AACACGAATA
GACCTTGCCA AACTAGGAGA GGGTTAA
|
|---|
| Protein sequence | MTKPYSIGLD IGTNSVGWAV TTDNYKVPSK KMKVLGNTSK KYIKKNLLGV LLFDSGITAE
GRRLKRTARR RYTRRRNRIL YLQEIFSTEM ATLDDAFFQR LDDSFLVPDD KRDSKYPIFG
NLVEEKAYHD EFPTIYHLRK YLADSTKKAD LRLVYLALAH MIKYRGHFLI EGEFNSKNND
IQKNFQDFLD TYNAIFESDL SLENSKQLEE IVKDKISKLE KKDRILKLFP GEKNSGIFSE
FLKLIVGNQA DFRKCFNLDE KASLHFSKES YDEDLETLLG YIGDDYSDVF LKAKKLYDAI
LLSGFLTVTD NETEAPLSSA MIKRYNEHKE DLALLKEYIR NISLKTYNEV FKDDTKNGYA
GYIDGKTNQE DFYVYLKKLL AEFEGADYFL EKIDREDFLR KQRTFDNGSI PYQIHLQEMR
AILDKQAKFY PFLAKNKERI EKILTFRIPY YVGPLARGNS DFAWSIRKRN EKITPWNFED
VIDKESSAEA FINRMTSFDL YLPEEKVLPK HSLLYETFNV YNELTKVRFI AESMRDYQFL
DSKQKKDIVR LYFKDKRKVT DKDIIEYLHA IYGYDGIELK GIEKQFNSSL STYHDLLNII
NDKEFLDDSS NEAIIEEIIH TLTIFEDREM IKQRLSKFEN IFDKSVLKKL SRRHYTGWGK
LSAKLINGIR DEKSGNTILD YLIDDGISNR NFMQLIHDDA LSFKKKIQKA QIIGDEDKGN
IKEVVKSLPG SPAIKKGILQ SIKIVDELVK VMGGRKPESI VVEMARENQY TNQGKSNSQQ
RLKRLEKSLK ELGSKILKEN IPAKLSKIDN NALQNDRLYL YYLQNGKDMY TGDDLDIDRL
SNYDIDHIIP QAFLKDNSID NKVLVSSASN RGKSDDVPSL EVVKKRKTFW YQLLKSKLIS
QRKFDNLTKA ERGGLSPEDK AGFIQRQLVE TRQITKHVAR LLDEKFNNKK DENNRAVRTV
KIITLKSTLV SQFRKDFELY KVREINDFHH AHDAYLNAVV ASALLKKYPK LEPEFVYGDY
PKYNSFRERK SATEKVYFYS NIMNIFKKSI SLADGRVIER PLIEVNEETG ESVWNKESDL
ATVRRVLSYP QVNVVKKVEE QNHGLDRGKP KGLFNANLSS KPKPNSNENL VGAKEYLDPK
KYGGYAGISN SFTVLVKGTI EKGAKKKITN VLEFQGISIL DRINYRKDKL NFLLEKGYKD
IELIIELPKY SLFELSDGSR RMLASILSTN NKRGEIHKGN QIFLSQKFVK LLYHAKRISN
TINENHRKYV ENHKKEFEEL FYYILEFNEN YVGAKKNGKL LNSAFQSWQN HSIDELCSSF
IGPTGSERKG LFELTSRGSA ADFEFLGVKI PRYRDYTPSS LLKDATLIHQ SVTGLYETRI
DLAKLGEG
|
|---|
| |