Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1461 |
Symbol | |
ID | 4437965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 1367919 |
End bp | 1370129 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639677066 |
Product | ABC-type amino acid transport system, periplasmic and permease components |
Protein accession | YP_820817 |
Protein GI | 116628198 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0765] ABC-type amino acid transport system, permease component [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA AACTTCTGAC ACTCTTTTTG AGTGTCATGT CAGCTCTCTT TGTTTTCGGA GCTAAGGCAT CTGCTAGCAC GATTTCAGTA GTTTCAGATA CAGCCTATGC CCCATTTGAA TTCAAAGACT CTGATCAGAC CTACAAGGGT ATCGATGTTG ATATTATCAA CGAAGTTGCC AAACGTAAGA ATTGGGATGT TAACCAAACT TATCCTGGTT TTGATGCAGC CGTTAACGCA GTTCAGTCAG GACAAGCAGA CGCCCTCATG GCAGGTACAA CTGTAACCGA TGCACGTAAG AAGGTCTTCA CTTTTTCAGA CACTTATTAC GACACATCAA TTGTTATTTA CACTCGTAGC AACGACAAAG TCAGCGACTA CAAACAATTG AAAGGTAAAA CAGTTGGTGT TAAAAATGGT ACCGCCGCTC AAACCTGGCT TGATAAAAAC GCTAGCAAGT ATAGTTTCAC TGTTAAAACT TTTGACACTA GTGACTTGAT GAACAACAGT TTGGACTCTG GTTCAGTTTA TGCAGCCATG GACGACACAC CAGTTGTTCA ATATGCTATT GGTCAAGGTA AAGACTATGC TATCAACATA AAGCCTGAAT CTATCGGTAG CTTCGCTTTC GCTGTAAAAA AAGGTGGAAA GCACGAAAGT CTTATCAAGG ATTTCAATGA AGCCCTTAAG GAAATGAAGG AAGACGGCAC CTACGATGAA ATCATGACCA AATGGTTGGG TGACTCGGCA AAAGCTTCTT CAAAATCTTC ATCGTCAAAA CCGTCGGAAG CTCTTAACTT GACTGGTGAT GCTAATGCAA AAGCTACTCC TACTAAGGAA ACTTACACCA TCTCAATGGA CTCATCGTTT GCACCATTTG AATATCAAAA TGGTTCTGGT AAGTATGTTG GTATCGACGT TGACATCATC AATGCCATTG CTAAAAACCA AGGTTTCAAT GTTAAATTAA CTAACCCTGG TTTCGATGCA TCACTTAATG CCGTTCAATC TAGCCAAGCC GATGCGGTAT TGGCTGGTAT GACCATCACT GATGCCCGTA AACAAATCTT TGATTTCTCA GATCCTTACT ACACTTCAAA CATTCGTTTA GCTGTGAAAA AAGGCTCTAA CATTAAGAAA TACGAAGATC TCAAAGGTAA GACTGTTGGT GCCAAAAACG GAACATCTTC TTACTCTTGG TTAGAAGAGA ATGCCGACAA ATATGGCTTC ACGCTTCGTG CATACGATGA AGCTTCTACT ATGTATGATA GCTTGAACTC TGGTTCAATC GATTCCCTTA TGGATGATGA AGCCGTACTT CTATACGCTA TCCAACAAGG ACGTAACTTT GAAACACCTA TTAAGGGAAT CTCTACTGGT AAAGTTGGCT TTGCTGTTAA AAAAGGGGCT AACCCTGAGT TGATTGAAAT GTTCAACAAT GGTTTAGCTG CTATTGTTAA AGACGGTACT TACGATAAGA TTATCAACAA ATACCTTGAC AATAACAAAT CTAAAGAAAA GAGCTCAACC AATGTTGCCG ATGAAACTAC AATCGTAGGC TTAATTAAAA ACAACTATAA ACAACTTCTC CAAGGTCTTG GAATTACCCT TGGATTGACC CTTCTTTCAT TTGCTATTGC CATGATTATC GGTATTATCT TCGGTATGAT GGCAGTTGCA CCAAACAAGA CCCTTCGTGT GATTTCACAA ATCTTTGTTG ACGTTGTCCG TGGTATTCCA TTGATGATCG TTGCAGCCTT CATCTATTGG GGTATTCCGA ACTTGATTGA AAATATCACC GGTCACCAGT CACCAATCAA TGACTTCGTG GCTGCGACTA TAGCCCTCTC ACTTAATGGT GGTGCTTACA TTGCTGAAAT TGTGCGTGGT GGTATCGAAG CTGTCCCTAT TGGTCAGATG GAAGCCAGCC GAAGCTTGGG TGTCCCATAC AATACAACAA TGCGTAAGAT CATCTTGCCA CAGGCTGTTC GTTTGATGTT GCCAAACTTC ATCAACCAAT TTGTTATCTC ATTGAAAGAT ACGACTATCG TATCAGCTAT CGGTTTGGTC GAACTCTTCC AAACTGGTAA AATCATCATT GCTCGTAACT ACCAATCATT CCGTATGTAT GCGATTTTGG CCATCATTTA CTTGGTCATC ATCACATGCT TGACGAAATT GGCTAAACGA CTAGAAAAGA GACTTAAATA A
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Protein sequence | MKKKLLTLFL SVMSALFVFG AKASASTISV VSDTAYAPFE FKDSDQTYKG IDVDIINEVA KRKNWDVNQT YPGFDAAVNA VQSGQADALM AGTTVTDARK KVFTFSDTYY DTSIVIYTRS NDKVSDYKQL KGKTVGVKNG TAAQTWLDKN ASKYSFTVKT FDTSDLMNNS LDSGSVYAAM DDTPVVQYAI GQGKDYAINI KPESIGSFAF AVKKGGKHES LIKDFNEALK EMKEDGTYDE IMTKWLGDSA KASSKSSSSK PSEALNLTGD ANAKATPTKE TYTISMDSSF APFEYQNGSG KYVGIDVDII NAIAKNQGFN VKLTNPGFDA SLNAVQSSQA DAVLAGMTIT DARKQIFDFS DPYYTSNIRL AVKKGSNIKK YEDLKGKTVG AKNGTSSYSW LEENADKYGF TLRAYDEAST MYDSLNSGSI DSLMDDEAVL LYAIQQGRNF ETPIKGISTG KVGFAVKKGA NPELIEMFNN GLAAIVKDGT YDKIINKYLD NNKSKEKSST NVADETTIVG LIKNNYKQLL QGLGITLGLT LLSFAIAMII GIIFGMMAVA PNKTLRVISQ IFVDVVRGIP LMIVAAFIYW GIPNLIENIT GHQSPINDFV AATIALSLNG GAYIAEIVRG GIEAVPIGQM EASRSLGVPY NTTMRKIILP QAVRLMLPNF INQFVISLKD TTIVSAIGLV ELFQTGKIII ARNYQSFRMY AILAIIYLVI ITCLTKLAKR LEKRLK
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