Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1452 |
Symbol | |
ID | 4437956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1359447 |
End bp | 1360241 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639677058 |
Product | amino acid ABC transporter periplasmic protein |
Protein accession | YP_820809 |
Protein GI | 116628190 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000020347 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAC TTTTCCTCGG GGCGATGGCT TTCCTTGTTG CTGTAACTTT GGTAGCTTGT GGGTCAAAAA AAGACGCTGA CGAATCTATT AAAGAAAATA AAAAACTTGT CGTGGCTGTC AGCCCAGACT ATCCACCATT TGAGTTCAAA ACTTTGGTAG ATGGTAAAGA CCAAGTAGTT GGTTCAGATA TCAAGTTGGC ACAAGCTATT GCGAATGAAC TCGGTGTTAA GCTTGAAGTT ACAACAATGA GCTTTGATAA CGTGCTCTCA AGCCTTCAAT CAGGTAAGGC TGATCTTGCT ATTTCAGGTA TCTCAGTAAC AGACGAACGT AAGAAAACCT TTGATTTCTC AGATCCTTAC TACGAAACAC AAAATGCTAT CATCGTTCGT AAAGATCAAG AGTCTACTTA CTCAAGTCTT GATGCTCTCA AAGGTAAGAA AGTAGCAGTT CAAAAAGGTA CCATTGAAGA AGGTCTTGCT AAGAAACAAT TGAAAGATTC AACAGTCATA TCACTTACAG CAATGGGTGA GGCGATTAAC GAGGTGAAAT CTGGTCAAGT TGATGCTGTT GACCTTGAAA AACCAGTAGC AGAAGGTTAC GTGGCACAAA ATTCAGATTT GGTCTTAGCA AGTGTTGCCC TCAAAGTTGA TGATGGCGAT GCAAAAGCAG TCGCTATGGC TAAAGGCAAC GACAAATTGA AAGAAGCAGT CAATAAAGTC ATCAAAAAAT TGAAAGCAGA TGGTACTTAC GACGAGTATA TCAAGGATGC TTCTAAATAT ACAGCAGCTG AATAA
|
Protein sequence | MKKLFLGAMA FLVAVTLVAC GSKKDADESI KENKKLVVAV SPDYPPFEFK TLVDGKDQVV GSDIKLAQAI ANELGVKLEV TTMSFDNVLS SLQSGKADLA ISGISVTDER KKTFDFSDPY YETQNAIIVR KDQESTYSSL DALKGKKVAV QKGTIEEGLA KKQLKDSTVI SLTAMGEAIN EVKSGQVDAV DLEKPVAEGY VAQNSDLVLA SVALKVDDGD AKAVAMAKGN DKLKEAVNKV IKKLKADGTY DEYIKDASKY TAAE
|
| |