Gene STER_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1452 
Symbol 
ID4437956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1359447 
End bp1360241 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content39% 
IMG OID639677058 
Productamino acid ABC transporter periplasmic protein 
Protein accessionYP_820809 
Protein GI116628190 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000020347 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TTTTCCTCGG GGCGATGGCT TTCCTTGTTG CTGTAACTTT GGTAGCTTGT 
GGGTCAAAAA AAGACGCTGA CGAATCTATT AAAGAAAATA AAAAACTTGT CGTGGCTGTC
AGCCCAGACT ATCCACCATT TGAGTTCAAA ACTTTGGTAG ATGGTAAAGA CCAAGTAGTT
GGTTCAGATA TCAAGTTGGC ACAAGCTATT GCGAATGAAC TCGGTGTTAA GCTTGAAGTT
ACAACAATGA GCTTTGATAA CGTGCTCTCA AGCCTTCAAT CAGGTAAGGC TGATCTTGCT
ATTTCAGGTA TCTCAGTAAC AGACGAACGT AAGAAAACCT TTGATTTCTC AGATCCTTAC
TACGAAACAC AAAATGCTAT CATCGTTCGT AAAGATCAAG AGTCTACTTA CTCAAGTCTT
GATGCTCTCA AAGGTAAGAA AGTAGCAGTT CAAAAAGGTA CCATTGAAGA AGGTCTTGCT
AAGAAACAAT TGAAAGATTC AACAGTCATA TCACTTACAG CAATGGGTGA GGCGATTAAC
GAGGTGAAAT CTGGTCAAGT TGATGCTGTT GACCTTGAAA AACCAGTAGC AGAAGGTTAC
GTGGCACAAA ATTCAGATTT GGTCTTAGCA AGTGTTGCCC TCAAAGTTGA TGATGGCGAT
GCAAAAGCAG TCGCTATGGC TAAAGGCAAC GACAAATTGA AAGAAGCAGT CAATAAAGTC
ATCAAAAAAT TGAAAGCAGA TGGTACTTAC GACGAGTATA TCAAGGATGC TTCTAAATAT
ACAGCAGCTG AATAA
 
Protein sequence
MKKLFLGAMA FLVAVTLVAC GSKKDADESI KENKKLVVAV SPDYPPFEFK TLVDGKDQVV 
GSDIKLAQAI ANELGVKLEV TTMSFDNVLS SLQSGKADLA ISGISVTDER KKTFDFSDPY
YETQNAIIVR KDQESTYSSL DALKGKKVAV QKGTIEEGLA KKQLKDSTVI SLTAMGEAIN
EVKSGQVDAV DLEKPVAEGY VAQNSDLVLA SVALKVDDGD AKAVAMAKGN DKLKEAVNKV
IKKLKADGTY DEYIKDASKY TAAE