| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1449 |
|---|
| Symbol | dnaG |
|---|
| ID | 4437953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1356882 |
|---|
| End bp | 1358693 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639677056 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_820807 |
|---|
| Protein GI | 116628188 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAATTG ATAAAACTTT AATAGAAGAT ATTAAGAGCA GTACCAATAT CGTCGACGTG
ATTGGTGAAG TTGTCAGTCT TAATCGGGCT GGTCGTAATT ACCTCGGCTT GTGCCCGTTC
CATAAGGAAA AAACTCCCTC ATTTAACGTT ATTGAGGATA GGCAGTTTTA CCATTGCTTT
GGTTGTGGCA AGTCTGGCGA TGTCTTCAAA TTTTTAGAAG AATATCGTCA GATTTCTTTT
CAAGAAAGTG TCAAGGTTTT GGCAGATCGA CTAGGTATCG CAGTTAGTAT AGATGTGCCA
AGGCAAGTTC AGCGGCAAAA TTCTCCTAAT CAAGCTTTTT ATGATCTTCA TGAGGATGCG
CTTAAGTTTT ACCACGCAGT CCTCATGACG ACCAAGATAG GAGAAGCGGC GCGTGCCTAC
CTCTATGAGC GTGGAATGAC TGACGAGTTA CTCAAGACTT TTCAAATTGG CTTATCCCCT
GACGAACCAG ATTATCTCTA CCAGTCAGTT TCAAAAAAAT ATGACGAAGA GGTGCTGACA
GAATCAGGTC TTTTTAATCT TTCTGAAAAT AATCGTATTT TCGATACTTT TAAAAATCGA
ATCATGTTTC CACTCAAAAA TGAGTTTGGA AAGACAATCG GTTTTTCAGG ACGTGTTTGG
ACTAAGGAAG ATATAGAGAA GGGGCAGGCC AAGTACAAAA ATACAAGGGC TACCCGTATT
TTCAATAAGT CCTACGAACT CTACCACTTG GATCAGGCTA AACCAGTGAT ACAGAAGACA
CATGAGGTTT ATCTGATGGA GGGGTTCATG GATGTCATTG CCGCCTATAG AGCTGGGCAT
GTTAATGCAG TGGCTTCTAT GGGAACGGCT CTGACTCCTG AGCATGTCAA TCGTCTTCGT
AAACTGACTA AAAAAATAGT TCTAACCTAT GATGGTGATA AACCTGGGCA AAATGCGATT
GCCAAGTCTT TGGAACTGTT ATCGGATTTT CAAGTTGATA TAGTTAAAAT TCCAGACAGT
ATGGATCCTG ATGAATATCT ACAGAAAACA TCCGAAAAGG CCTTGGGTAA ACTCTTGGTT
GAGTCCCGCA TTTCAGATGT GGAATTTTGG ATTGGACAGC TCAAGCCTGC TAATGTAGAC
AACCTTCAAG CGGAGATTGC CTATGTCGAG CAGATTGCAA AGATTATTGC TAAGTCGCCT
TCTGTAACGG CACAAAATTC CTACATTTCT AAGGTGGCTG ACCTTTTGCC AGACTTTGAT
TTTTTCCAAG TTGAGCAAGC GGTCAATAAC GCACGGTTGA CCATGAGAAA TCAGCAGATG
GCTCAATTAT CAGCTGCTAG TAATAGTGCT TACGAGTCTT CAGCATCAGG ATTTAGAGGG
ACGGTCAAAC TACCTTCTAC ACCTAAGATT ACAGGTCTTC GTCGCGCGGA AAATCAACTC
TTCCATCGCA TGCTTAATCA TCCTATGATT TTAAATGACT ATCGTATGCG GGATGACTTT
TTCTTCCAAA CACCTGAGTT AGAAGAACTC TTTCAGATTT TGAAGCGAGA TGGTCAAATT
GATACGGTAG CCTTGTCTGT GCTTTCTCAA GAAGTACAAA CAGCCTATTA TCAGGTTTTA
GAGGAAATTT TGCCACCTGA AACCAATTTA GAGGAAGTCC AGGCTATTGA AGAGCGTAGA
AATCATTTTC TGAGGGAACA GGACTTCCGT AAGCAAAGTA AACAAATAAG AGAATCAAGT
AACCACGGTG ATGTGGATGC AGCGGTGGAA GCCCTGCAAA TGCTCATCGC CCAAAAACGA
GATATGGAGT AA
|
|---|
| Protein sequence | MVIDKTLIED IKSSTNIVDV IGEVVSLNRA GRNYLGLCPF HKEKTPSFNV IEDRQFYHCF
GCGKSGDVFK FLEEYRQISF QESVKVLADR LGIAVSIDVP RQVQRQNSPN QAFYDLHEDA
LKFYHAVLMT TKIGEAARAY LYERGMTDEL LKTFQIGLSP DEPDYLYQSV SKKYDEEVLT
ESGLFNLSEN NRIFDTFKNR IMFPLKNEFG KTIGFSGRVW TKEDIEKGQA KYKNTRATRI
FNKSYELYHL DQAKPVIQKT HEVYLMEGFM DVIAAYRAGH VNAVASMGTA LTPEHVNRLR
KLTKKIVLTY DGDKPGQNAI AKSLELLSDF QVDIVKIPDS MDPDEYLQKT SEKALGKLLV
ESRISDVEFW IGQLKPANVD NLQAEIAYVE QIAKIIAKSP SVTAQNSYIS KVADLLPDFD
FFQVEQAVNN ARLTMRNQQM AQLSAASNSA YESSASGFRG TVKLPSTPKI TGLRRAENQL
FHRMLNHPMI LNDYRMRDDF FFQTPELEEL FQILKRDGQI DTVALSVLSQ EVQTAYYQVL
EEILPPETNL EEVQAIEERR NHFLREQDFR KQSKQIRESS NHGDVDAAVE ALQMLIAQKR
DME
|
|---|
| |