| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1448 |
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| Symbol | |
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| ID | 4437952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1355769 |
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| End bp | 1356878 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639677055 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_820806 |
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| Protein GI | 116628187 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000454729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACGA AAAAACAAAA TACAGCATTT AACGTTCAAG TCGCTGATTT CATTCGTAAT
CACAAAAAAG CTGGTACAGC AATTGATGAT GAAATCACAG AAAAACTAGT TATCCCATTT
GTTTTAGATG CTGATGGGAT TGATGACCTT TTGGAACGTT TGACAGATGG TGGTATCTCT
ATTACTGATA AAGATGGAAA TCCTTCATCT AAATATGTTG TTGAGGCACC AAAACCAGAA
GAGCTTACAG ACGAGGAGCT TCTTGGTTCA AACTCAGCTA AAGTCAATGA CCCTGTTCGT
ATGTACCTCA AAGAGATTGG GGTAGTGCCC CTCTTGAGTA ACGAAGAGGA AAAAGAATTG
GCTATCGCTG TTGAAAATGG TGATTTGGAA GCTAAACAAC GTTTGGCAGA AGCCAACCTT
CGTTTGGTAG TCTCAATCGC TAAACGCTAT GTCGGACGTG GCATGCAGTT CTTGGACTTG
ATTCAAGAGG GTAACATGGG GCTTATGAAA GCCGTTGATA AATTTGACTA CTCAAAAGGT
TTCAAGTTTT CAACTTATGC GACATGGTGG ATTCGTCAAG CAATCACTCG TGCCATCGCA
GACCAAGCAC GTACCATCCG TATCCCAGTT CACATGGTTG AAACTATCAA TAAATTGGTA
CGTGAGCAAC GTAACCTCTT GCAAGAGTTG GGACAAGACC CAACACCTGA GCAAATTGCT
GAGCGTATGG ATATGACACC AGATAAGGTT CGTGAAATCC TTAAGATTGC TCAAGAACCA
GTCTCACTTG AAACACCTAT CGGTGAAGAG GATGACAGCC ATTTGGGTGA TTTTATCGAA
GATGAAGTTA TCGAAAATCC AGTAGATTAC ACAACTCGTG TCGTTCTTCG TGAACAATTG
GATGAGGTGC TTGATACCCT TACAGACCGT GAAGAAAATG TTCTACGTCT CCGTTTCGGT
CTTGATGATG GTAAGATGCG TACCTTGGAA GATGTTGGTA AAGTCTTCAA CGTTACTCGT
GAACGTATTC GTCAGATCGA AGCTAAAGCC CTTCGAAAAT TACGCCATCC AAGTCGCAGC
AAACAACTTA AAGACTTTAT TGAAGACTAA
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| Protein sequence | MATKKQNTAF NVQVADFIRN HKKAGTAIDD EITEKLVIPF VLDADGIDDL LERLTDGGIS
ITDKDGNPSS KYVVEAPKPE ELTDEELLGS NSAKVNDPVR MYLKEIGVVP LLSNEEEKEL
AIAVENGDLE AKQRLAEANL RLVVSIAKRY VGRGMQFLDL IQEGNMGLMK AVDKFDYSKG
FKFSTYATWW IRQAITRAIA DQARTIRIPV HMVETINKLV REQRNLLQEL GQDPTPEQIA
ERMDMTPDKV REILKIAQEP VSLETPIGEE DDSHLGDFIE DEVIENPVDY TTRVVLREQL
DEVLDTLTDR EENVLRLRFG LDDGKMRTLE DVGKVFNVTR ERIRQIEAKA LRKLRHPSRS
KQLKDFIED
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