Gene STER_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1416 
Symbol 
ID4437998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1325924 
End bp1327129 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content42% 
IMG OID639677023 
Productmajor facilitator superfamily permease 
Protein accessionYP_820774 
Protein GI116628155 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00145831 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCCA AAAATCGTTA CCTCATCGCA AGCTGCGGTG TTATCTTGCA TTTAATGTTG 
GGATCTACTT ATGCTTGGAG TGTTTATCGT AATCCTATTA TCGCTGAAAC TGGCTGGAAT
CAATCGTCAA TTGCTTTTGC CTTCTCACTT GCGATTTTCT GTCTGGGCAT GTCTGCTGCC
TTTATGGGAC AAGTTGTTGA TAAATTTGGT CCTAGGGTGA CTGGGACCAT CTCAGCTATC
CTGTACGCAT CTGGAAATAT TTTAACCGGT GTTGCACTTG CTAATCATAG TCTTTTACTA
CTTTATCTAG GCTATGGTGT TCTTGGCGGT ATCGGGCTTG GTACGGGCTA TGTCACACCC
GTATCAATGA TTATCAAGTG GTTTCCTGAT AAACGTGGGC TGGCAACTGG GCTAGCTATC
ATGGGGTTTG GCTTTGCCTC TCTTTTAACC AGTCCAATTT CGTATTTCTT AATCACCAAA
TATGATGTTA TCAACACCTT TTACCTGTTA GGTGTGGCTT ATTTTCTGGT TATGCTTATC
GTCTCACAAT TTCTCAAATT TCCATACTAC AGTGAACAGG ATACTAACGA CAGTCATAAG
CAATTAAGCC AAGGTATTGG GGCTAAAAAA GCCTTAAAAA CGGTTGAATT TTACCTGCTC
TGGCTAATTC TCTTCATCAA CATTTCTTGT GGGCTTGCCT TAATCTCTGT TGTCTCACCT
ATGGCACAAG ATGTAGCTGG CATGACTGCT AACCAAGCTG CCATTATCGT CGGGCTTATG
GGAATTTTCA ATGGCTTTGG AAGATTGCTC TGGGCTAGCT TGTCAGACTA TATTGGTCGT
CCGCTGACCT GCACTATTTT ATTTGTTGTT AATATCCTCA TGACTATATC TCTCATATTC
CTTCACGCGC CAGCATTATT CACCATTGCC ATGGCTGTGC TCATGACTTG CTACGGAGCT
GGCTTCTCAC TCATTCCACC GTATCTTAGC GATATTTTCG GTGCTAAAGA GCTAGCAACC
ATGCACGGTT ATATTTTAAC AGCTTGGGGA ATGGCTGCGC TAGCAGGTCC AATGTTACTT
GCTGTCATAT ACTCAGCAAC CAAATCATAC ACAAGCACTC TTGTCGTCTT CATCCTACTT
TATCTATTTG CGCTAGCTAT TACACTTTGT CTAAAATCAA AAAAAGAAAA TAAATATTTG
TCATAA
 
Protein sequence
MLAKNRYLIA SCGVILHLML GSTYAWSVYR NPIIAETGWN QSSIAFAFSL AIFCLGMSAA 
FMGQVVDKFG PRVTGTISAI LYASGNILTG VALANHSLLL LYLGYGVLGG IGLGTGYVTP
VSMIIKWFPD KRGLATGLAI MGFGFASLLT SPISYFLITK YDVINTFYLL GVAYFLVMLI
VSQFLKFPYY SEQDTNDSHK QLSQGIGAKK ALKTVEFYLL WLILFINISC GLALISVVSP
MAQDVAGMTA NQAAIIVGLM GIFNGFGRLL WASLSDYIGR PLTCTILFVV NILMTISLIF
LHAPALFTIA MAVLMTCYGA GFSLIPPYLS DIFGAKELAT MHGYILTAWG MAALAGPMLL
AVIYSATKSY TSTLVVFILL YLFALAITLC LKSKKENKYL S