| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1396 |
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| Symbol | |
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| ID | 4438017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1304279 |
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| End bp | 1306675 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639677005 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_820756 |
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| Protein GI | 116628137 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTAG TTGCACAAAT AATTGTAGAT GTTCCTCTAA TGCAGACGGA CAGGCCTTAT
AGTTACCTTG TACCAGAATC CATGCAGGGG CAAATTACCA TCGGTATGAG GATTCATGTG
CCTTTTGGTA AAGGAAATCG TCTCTTGCAA GGGTTTGTTA TTGGCTTTGG AGAGCAAGAA
AATGTAAGAA ATCTGCCAGA CTTGAAGCCA ATTGCGGAAC TTTTGGATTA TGAACCAGTC
CTTAATCAGG ATCAGCTGGA TTTGGCTGAC CAAATGCGAC ACACGGTTTT TTCCTATAAG
ATTTCCATCT TGAAGTCTAT GCTTCCGGGT CTCCTTAATT CACAGTATGA CAAAGTTATC
ATGGCAACTG ATAAACTGAG CGAAGAGGAG AGGGACATTT TTCTTCAGGG GCGAGACCAT
ATTCTCTTCT CTCAATTGTC GAAAGAACAA GGTCAAGCCA TTCCGCGTTT GGTGGGATCT
GGTCGCGTAA CGGTTGATTA CATTGCTAGG GATAAACAAA ATATAAAAAC GGAGAAACAT
TATAGTGTGC AAAGAGGCAT TTTAGAGACT TTGGATATTT CGCAACGAGC CAAGAAGCGG
CTGGAGTTGC GGGACTTCTT GTTAGAAAAG AATGAGCCTG GAAAGTTAGT AGACCTGCAT
AAACTTTTTT CTCGAGATGT GGTGAAGTTT TTCATTGAGG CTGGAGCTCT AGACATCACT
GAAGTTGAGG TCAATCGTGC TGATAGCTAC TTTGAAAAGG TAGAGAAGAC GGATTTTCTA
GAGCTTAATG CTCAGCAAGC ACATGCTGTT GAAGTAATGA CAGGTCAGAT TGGTCATGGT
GGGAAGCCGT TCTTGTTGGA AGGAGTGACG GGGTCAGGTA AGACTGAGGT TTACCTGCAT
CTTATTGAGA GAACCTTGGC TATGGGAAAA ACTGCCATTG TCTTGGTTCC AGAAATTTCT
CTGACGCCAC AAATGACCAA TCGTTTCATC TCCCGTTTTG GTGACTTGGT AGCAATCATG
CATTCAGGCT TGTCAGATGG TGAAAAATTT GACGAGTGGC GTAAGGTTAG GTCTGGTCAA
GCAAAAGTCG TTGTAGGAGC ACGTTCTGCT ATCTTTGCTC CCTTGGACAA TATTGGAGCT
ATCATTATCG ATGAGGAGCA CGAGGCGACC TATAAGCAGG AATCCAATCC TCGCTATCAT
GCTAGAGATG TGGCCTTGCT TAGGTCCAAA AGCCATGGCG CTATTCTTGT ACTTGGTTCA
GCCACGCCTT CTATTGAGTC GCGAGCGAGG GCTCAGAAAG GGGTCTACCA TTTTTTTAAA
TTGACGGAGA GGGCCAATCC TAGTGCTAAA ATTCCGCAGG TTGAAGTGGT GGACTTTAAG
GACTTTGTCG GTAGACAAGA GGCGAGTGAT TTTACGCCAC CTCTCTTGGA GAAAATCCGA
GAGCGATTGG CACGTAAGGA ACAAGTCGTT TTGTTGTTGA ATCGTCGTGG ATATTCTTCA
TTTGTCATGT GTCGTGACTG TGGCTATGTG GATGACTGTC CGAACTGTGA TATTTCACTG
ACTTTGCATA TGGATACCAA GACCATGAAT TGTCACTACT GTGATTTTCA AAAAGCTATT
CCTAATGTCT GTCCTAATTG CCAGAGTCGT CAGATTCGCT ATTATGGGAC TGGGACACAG
AAGGCTTATG ATCAATTGAC GGAACTTTTT CCAGAAGCCA GAGTGATTCG TATGGATGTT
GATACTACAC GTAAAAAAGG CGCTCACGAG AAACTTTTAG AGACTTTTGG GAGTGGCAAG
GCTGATATTC TGCTAGGCAC TCAAATGATT GCCAAGGGCT TGGATTTTCC CAATGTTACC
TTGGTAGGGG TCTTAAATGC GGATACGTCG CTAAATTTAC CAGATTTTCG TTCGGCTGAG
CGCACTTTCC AGCTGTTGAC TCAGGTGGCT GGTCGTGCTG GTCGTGGGGA CAAGGAAGGG
GAGGTTATTA TTCAGACCTA TAACCCTAGT CATTATGCCA TTCGTTTTGC TCAGCAACAG
GATTATGAGG GATTCTATGC CTATGAGATG GGGATTCGCC GTCAGTTGGC CTACCCGCCA
TATTTTTATA CGGTAGGGAT CACTCTTTCC CACAAGGATG AAGAGTTTGT AGTCCGTAAG
AGCTATGATG TCATGGCTTG TTTAAGAGAA CATTTGTCGG ACAAGGTGAC TTTCTTGGGA
CCAACACCAA AACCTATTGC CCGAACACAT AACCTTTATC ATTATCAGAT TATTATCAAA
TATCGTTTTG AGGATAGCTT GGAAGAGACA CTTAATAGGA TCCTTGATAT GACTCAGGAA
CCTGAAAATA AGGATCTACG TTTGATTATC GATCATGAGC CTCAGAATTT TACCTAA
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| Protein sequence | MVLVAQIIVD VPLMQTDRPY SYLVPESMQG QITIGMRIHV PFGKGNRLLQ GFVIGFGEQE
NVRNLPDLKP IAELLDYEPV LNQDQLDLAD QMRHTVFSYK ISILKSMLPG LLNSQYDKVI
MATDKLSEEE RDIFLQGRDH ILFSQLSKEQ GQAIPRLVGS GRVTVDYIAR DKQNIKTEKH
YSVQRGILET LDISQRAKKR LELRDFLLEK NEPGKLVDLH KLFSRDVVKF FIEAGALDIT
EVEVNRADSY FEKVEKTDFL ELNAQQAHAV EVMTGQIGHG GKPFLLEGVT GSGKTEVYLH
LIERTLAMGK TAIVLVPEIS LTPQMTNRFI SRFGDLVAIM HSGLSDGEKF DEWRKVRSGQ
AKVVVGARSA IFAPLDNIGA IIIDEEHEAT YKQESNPRYH ARDVALLRSK SHGAILVLGS
ATPSIESRAR AQKGVYHFFK LTERANPSAK IPQVEVVDFK DFVGRQEASD FTPPLLEKIR
ERLARKEQVV LLLNRRGYSS FVMCRDCGYV DDCPNCDISL TLHMDTKTMN CHYCDFQKAI
PNVCPNCQSR QIRYYGTGTQ KAYDQLTELF PEARVIRMDV DTTRKKGAHE KLLETFGSGK
ADILLGTQMI AKGLDFPNVT LVGVLNADTS LNLPDFRSAE RTFQLLTQVA GRAGRGDKEG
EVIIQTYNPS HYAIRFAQQQ DYEGFYAYEM GIRRQLAYPP YFYTVGITLS HKDEEFVVRK
SYDVMACLRE HLSDKVTFLG PTPKPIARTH NLYHYQIIIK YRFEDSLEET LNRILDMTQE
PENKDLRLII DHEPQNFT
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