| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1394 |
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| Symbol | |
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| ID | 4438015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1302014 |
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| End bp | 1303342 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639677003 |
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| Product | RNA-binding protein |
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| Protein accession | YP_820754 |
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| Protein GI | 116628135 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTTGG CCAATGATTG GAAAAAAACA GCCCGTGGAC AGGCACTTGA AGTTTTAGAA
GAAGTCTTTC AAGAAGGGGC TTACTCAAAT ATTGCCCTCA ATGCACGTCT GAGCAATTCA
TGTCTAACAG ATAAGGACAA GGCCCTGGTA ACGGAAATTG TTTATGGAAC TGTTGCCCGT
AAGATCACTT TGGAATGGAT CTTAGCCCAT GTCATTGAGG ATCGAGATAA ACTTGAAGCT
TGGGTCTATG ACCTATTGCT TTTGAGTCTT TACCAGTTGG CCTACTTGGA TAAGATTCCA
TCCCATGCGG TGGTTAACGA TGCCGTTTCT ATTGCCAAAA ATCGTGGCAA TAAAAAAGGA
GCTGAGAAGC TGGTGAATGC AGTTCTTCGC AAACTATCTA GCCAGCCATT GCCAGATCCA
AGCAAGATTA AACGTGTCAA TAAACGCTAT TCTGTTCAAT ATTCCCTACC TGTATGGTTG
GTGAAAAAGC TTATTGAGCA GTATGGGGAA GAGCGAGCCC TTGCTATTTT CCAAAGTCTC
TTTGTGAGAA ACAAGGCCAG TGTCCGTGTG ACGGATGTGT CCCGTATGGA AGAAATTGCG
GAGGCCACTG GAGCTGAGCG TTCAGATTTG TCACCAGTTG GGCTTGTTAA GTCTTCGGGT
TATTTTGCTG GGACTGATTA TTTTAAAGAG GGGTTATTGA CCATTCAGGA TGAGACTAGT
CAGCTAGTTG CACCAACTTT AGCAATTCAA GGTATGGAAG AAATCCTGGA TGCTTGTGCG
GCACCCGGAG GTAAGACTGT CCATATGGCA TCATACTTGA CGAGTGGACA TGTGACGGCT
CTTGACCTTT ATGATCATAA GCTTGCTCTT ATTAAAGAAA ATGCACAACG ACTTGGTCTG
GCTGATAAGG TTAAAACTCA GAAACTAGAT GCTCGTCAGG TGCATCAAGT CTTTCCGACT
GCTAGTTTTG ACAAGATTCT AGTGGATGCT CCTTGCTCAG GGATCGGTCT CATTCGTCGA
AAACCAGACA TAAAATACAA TAAGGATCTC CAAGACTTTA AATCCCTCAA GTCTGTGCAA
TTGGATATAT TATCCAGTGT TTGTCAAACC CTACGAAAAG GTGGTATAAT AACCTACAGT
ACTTGCACCA TCATAGCAGA AGAAAATCAA GAGGTAATTC AGGCCTTTCT TGAGAGCCAT
CCTGATTTTG AGCAAGTTGC CTTGGATCAT CCATGCAAGG ACATCGTGGT CAATGGCTAT
TTGGCTATCA CCCCCGAACA GTATCTAACT GATGGTTTTT TTATCGCTCA GTTGCGTAAG
AAAGTCTAG
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| Protein sequence | MSLANDWKKT ARGQALEVLE EVFQEGAYSN IALNARLSNS CLTDKDKALV TEIVYGTVAR
KITLEWILAH VIEDRDKLEA WVYDLLLLSL YQLAYLDKIP SHAVVNDAVS IAKNRGNKKG
AEKLVNAVLR KLSSQPLPDP SKIKRVNKRY SVQYSLPVWL VKKLIEQYGE ERALAIFQSL
FVRNKASVRV TDVSRMEEIA EATGAERSDL SPVGLVKSSG YFAGTDYFKE GLLTIQDETS
QLVAPTLAIQ GMEEILDACA APGGKTVHMA SYLTSGHVTA LDLYDHKLAL IKENAQRLGL
ADKVKTQKLD ARQVHQVFPT ASFDKILVDA PCSGIGLIRR KPDIKYNKDL QDFKSLKSVQ
LDILSSVCQT LRKGGIITYS TCTIIAEENQ EVIQAFLESH PDFEQVALDH PCKDIVVNGY
LAITPEQYLT DGFFIAQLRK KV
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