Gene STER_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1390 
Symbol 
ID4438011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1297605 
End bp1298303 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content39% 
IMG OID639677000 
Producthypothetical protein 
Protein accessionYP_820751 
Protein GI116628132 
COG category[S] Function unknown 
COG ID[COG4758] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000147243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAT TTAATTTTTT CTTAGTGGTG GAGGCTCTTC TTTTAACTCT AGGCTTAATC 
ACCATCTTTA ATAATGATAT TATCCGTTTT ATTTTCATAC TGGTTTTAAC CTTGTTGGCC
GTTCGCTTTT TTAACAAGGA GTCCAAGAGC GACTTTGTCT TGACGATCTG CTTGATTTCA
CTTTTTTTGG TTTCCATGTG GAATATCTAT GTGGTTCTTG CTATCTTAGT GGGTGTGGCC
TATGTCATGA TTAACCATTT TTCACAGGTC AAGAAAAAGA ATCGTTACGC TCTCATTCAA
TTTAAGGAAG ATGACTTGAA TCCACAGGCT GTGCGAAATC AGTGGATTGG AACTCATATG
GAACCTGTCA GTGATCGCTA TGACTTTGAT GATATTAATA TTATCCGTTT CTTTGGGACA
GATGTGATTG ATTTGACCCA GGTTATCGTT TCAGGTCGAG AAAATGTCGT CATTTTACAG
AAACTTTATG GACCAACGAC AATCTTGGTA CCAATTGATA TTTCCGTTAA GTTGAATATA
TCAGCTATCT ATAGCTCTGT GACCTTCTTT GATGAAGATG AATACGACCT CCGTTACGAA
AGCTTGACCT TGCAGGGGGC AGAGTATGAG CATGCCCATC GAACGCTTAA ATTGATTCTC
AATGTGGGAG CTGGACCAGT GGAGGTACGT CGTAAATGA
 
Protein sequence
MTKFNFFLVV EALLLTLGLI TIFNNDIIRF IFILVLTLLA VRFFNKESKS DFVLTICLIS 
LFLVSMWNIY VVLAILVGVA YVMINHFSQV KKKNRYALIQ FKEDDLNPQA VRNQWIGTHM
EPVSDRYDFD DINIIRFFGT DVIDLTQVIV SGRENVVILQ KLYGPTTILV PIDISVKLNI
SAIYSSVTFF DEDEYDLRYE SLTLQGAEYE HAHRTLKLIL NVGAGPVEVR RK