| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1367 |
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| Symbol | |
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| ID | 4438129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1273959 |
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| End bp | 1275863 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639676983 |
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| Product | Na+/xyloside symporter or related transporter |
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| Protein accession | YP_820736 |
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| Protein GI | 116628117 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2190] Phosphotransferase system IIA components
[COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter
[TIGR00830] PTS system, glucose subfamily, IIA component |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.316422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAT CTAAAGGTCA GATGAAGTCT CGTTTATCCT ACGCAGCTGG TGCTTTTGGT
AACGACGTCT TCTATGCAAC CTTGTCAACA TACTTTATCA TGTTTGTGAC AACTCACTTG
TTTAACACAG GTGATCCAAA GCAAAATAGT CACTACGTAC TATTAATCAC TAACATTATC
TCTATTTTGC GTATCTTGGA AGTATTTATC GATCCATTGA TCGGTAATAT GATTGATAAC
ACTAATACTA AGTATGGTAA ATTCAAACCA TGGGTAGTTG GTGGTGGTAT CATCAGTTCT
ATCACCTTGT TGCTTCTCTT CACCGATTTA GGTGGTTTGA ATAAAACAAA TCCTTTCTTG
TACCTTGTAC TTTTTGGAAT TATCTACCTT ATAATGGATG TCTTCTACTC GATTAAAGAT
ATCGGTTTCT GGTCAATGCT TCCTGCCTTG TCTCTTGACA GTCACGAACG TGAAAAAATG
GCAACTTTTG CCCGTATTGG TTCTACGATT GGTGCCAATA TTGTAGGTGT TGCCATCATG
CCAATCGTTT TGTTCTTCTC TATGACGAAC AGTAGTGGCT CTGGAGATAA ATCTGGATGG
TTCTGGTTTG CATTTATCGT TGCACTCATT GGTGTGATTA CATCAATTGC TGTTGGTATT
GGTACACGTG AAGTTGAGTC AAAACTTCGT GATAACAATG AAAAAACTAG CCTTAAACAA
GTCTTTAAAG TTCTTGGTAA AAACGACCAA TTGATGTGGC TGTCTCTCGG ATATTGGTTC
TATGGTCTTG GTATTAATAC ACTTAATGCT CTTCAACTTT ATTACTTCAC ATTTATCCTT
GGTGATTCAG GGAAATACTC AATCCTTTAC GGATTGAATA CAGTTGTTGG TTTGGTTTCA
GTTTCACTGT TCCCTAGTCT TGCTGGTAAA TTCAACCGTA AACGTTTGTT CTATGGATGT
ATTGCAGTAA TGCTCGGTGG TATCGGAATC TTTAGTATTG CAGGTACTTC ACTTCCAATG
ATCTTGACTG CAGCTGAACT CTTCTTCATT CCACAACCTC TTGTGTTCCT TGTTATCCTT
ATGATTATCT CTGACTCAGT AGAATATGGT CAATGGAAAT TGGGACACCG TGATGAATCA
CTTACTTTGT CAGTTCGTCC ACTTGTTGAT AAACTTGGTG GTGCGATGTC AAACTGGCTT
GTTTCTACAA TTGCCGTAGC TGCCGGTATG ACAACAGGTG CCTCAGCATC AACAATTACA
ACACATCAAC AGTCTATTTT TAAGCTTAGC ATGTTTGGTT TCCCAGCAGC AGCAATGCTT
ATCGGTGCCT TCATTATTGC TCGTAAAATC ACTTTGACTG AAGCACGTCA CGCTAAAATT
GTTGAAGAAT TGGAACATCG CTTTAGCGTA GCAACTTCTG AAAATGAAGT TAAAGCTAAC
GTCGTATCTC TTGTAACCCC TACAACTGGT TATTTGGTTG ATCTCTCAAG TGTTAATGAT
GAACACTTTG CTTCAGGTAG CATGGGTAAA GGTTTCGCCA TTAAACCTAC TGATGGAGCT
GTCTTTGCAC CAATTAGTGG TACCATTCGT CAAATTCTTC CTACTCGCCA TGCAGTTGGT
ATTGAAAGTG AAGATGGTGT CATTGTTCTT ATCCACGTTG GCATCGGAAC AGTTAAACTT
AATGGTGAAG GATTCATTAG TTACGTAGAA CAAGGTGATC GTGTTGAAGT TGGACAAAAA
CTTCTTGAGT TCTGGTCACC AATTATTGAG AAAAATGGTC TTGATGACAC AGTACTTGTC
ACTGTAACTA ATTCAGAAAA ATTCAGTGCT TTCCATCTTG AACAAAAAGT TGGAGAAAAG
GTAGAAGCTT TGTCTGAAGT TATTACCTTC AAAAAAGGAG AATAA
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| Protein sequence | MEKSKGQMKS RLSYAAGAFG NDVFYATLST YFIMFVTTHL FNTGDPKQNS HYVLLITNII
SILRILEVFI DPLIGNMIDN TNTKYGKFKP WVVGGGIISS ITLLLLFTDL GGLNKTNPFL
YLVLFGIIYL IMDVFYSIKD IGFWSMLPAL SLDSHEREKM ATFARIGSTI GANIVGVAIM
PIVLFFSMTN SSGSGDKSGW FWFAFIVALI GVITSIAVGI GTREVESKLR DNNEKTSLKQ
VFKVLGKNDQ LMWLSLGYWF YGLGINTLNA LQLYYFTFIL GDSGKYSILY GLNTVVGLVS
VSLFPSLAGK FNRKRLFYGC IAVMLGGIGI FSIAGTSLPM ILTAAELFFI PQPLVFLVIL
MIISDSVEYG QWKLGHRDES LTLSVRPLVD KLGGAMSNWL VSTIAVAAGM TTGASASTIT
THQQSIFKLS MFGFPAAAML IGAFIIARKI TLTEARHAKI VEELEHRFSV ATSENEVKAN
VVSLVTPTTG YLVDLSSVND EHFASGSMGK GFAIKPTDGA VFAPISGTIR QILPTRHAVG
IESEDGVIVL IHVGIGTVKL NGEGFISYVE QGDRVEVGQK LLEFWSPIIE KNGLDDTVLV
TVTNSEKFSA FHLEQKVGEK VEALSEVITF KKGE
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