| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1364 |
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| Symbol | |
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| ID | 4438126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1265636 |
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| End bp | 1268815 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639676980 |
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| Product | ATP-dependent dsDNA exonuclease |
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| Protein accession | YP_820733 |
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| Protein GI | 116628114 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC
[TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCAG TCCAGTTAGA ATTGACCAAT TTTGGACCAT ATCGTAAGGA AGTTATTAAT
TTCACTCAGT TTGACCATGC TCCCCTCTTT TTGATTGGAG GGGATACAGG GGCTGGTAAG
AGTACTCTCT TTGATGCCAT GACGGTAGCC TTGTTTGCTA CGACCAGTGG TGATCGTAAT
GTTGAGGAGA TGCGGTCAAC TTTCGCTGGT CCAGAGGATG ATTTGACCAA GGTGACTTTC
TATTTCCAAC AAGGCAATCA CCTTTATCGC ATTGACCGAG TTCTCCAGCA AGAGAGGGCC
AAGCAGGGTG GGGGCACTAC CATGCAAAAG GCGACGGCTT CTCTAGTCAT TGTGGATAAG
ATTGGTGGTC AGGAAATTGA AAAGCTTGGG GATAAGATCA AGGAAGTGAG TGACCAGATT
GAGCAGATTT TGGGGCTCAA TGCTGAGCAG TTCAAACAGA TTATCCTCTT ACCGCAAAAT
GATTTTAGCC GTTTTTTGAA GGAAGATTCC AAGACTAAGA CTCAAATTTT AAAGAAAATC
TTTGGGACAG GTATCTTTGA CCGTTTTCAA AAGAGTTTGG AAGAGCGTCT TCGTCAGAGC
AATAAGGATA TGGATAAGCG TCAGGCTCAG ATAGATAGCC ACTTTGCCAG TCAGGTTTGG
TCGGAGGAAG AATTAACTGT CTTGGCGTCA ACGCCAGCCT CTGAAAAATT GGCACGTCTT
GAAGAGTTTT TGTCTCAGCG TCAAGAAAGT CTTACGGAGC AAAAAAGTAT CTTGAAGGCT
GCCCACGAGG ATTTGGCACA ACTGCAGAAG AGCTTCCAAA CTGCCCAAGA TTTGGCAAAG
ATTTTTCAAG AATTGGAGCA AGCCAAGGAA CGTTACCGTC TGGAAATTGA GGAGGGGGCT
CAAGGACAGG CAGAGGCAAA AGTGCATCTG GAGGAATTAC AGTTTGCTCA AGGTCTGCAG
GAAACCATTC GGACCTTGAA GCAGTATCGG AAACAGTTGA TGCAATTAGA GCAGGACCTT
GAAATTGCTC AAGAAGCCTT AAGTGAAAAG CAACAGGCGT TTGAGGATGT TAAGGCTAAA
AAAGAGGAAC TCGCAATTCA ATCTGAGGAT TTTCTTCAAA AAGAAGAGGA GCTTGAAACT
TGGAAAGAGG ATATTATCTA TTCCCAGAGT CTTGCCCAAG AACAGGAGAA AATCAAACGT
TCAACGACTA ACTACAAGCA GTTGGAAGAG ACCTATCAGC AGGCTAGAAA AGAGGTTGAG
ATGCTTAACA AGTCCTTGTC TGACTTGGAG GCTAATCGTC TTAGTTTAGA GAGTTTACAT
GAGGCCGAAA AACTCTTCCA GATTGTGGGC TACAGTGTGG AGAATCAACT TGCTCAGGAC
CTGAAAGAGA TAGAGAACTT GAATCAGGAG TTGACAAAGA CCGAAAAACG TCATCAAACG
TTATCTTTTG ATATTGATCA AGCTCAAGAA ATTCTCAAAG AATTGGAAGA GGAGTTAAGA
AGGACTTTGG TTTCACGCCG TCAACTCATG ATTGTCCAAC TGCAGGCAGA GTTAGAGGAG
GGGCATCCTT GTATGGTTTG TGGTGCTCTG GAACACCCTA ATGTTGGTGG AGCACAGGCT
GATGAAGTGG CCTTGAAAAA TCTCATGGAT CAGGTGGAGA AGCTTCAAGC TCAAAAAGAA
AAGCAAGTCG CTACTTTATC AAATCGTCAG GCTACCTTGA GTGAAGTTGC ATCTAAACGT
CAGGATTTGC TTGACCAAGT GACTAAAGTC AAGGCAACTC TTGAAAAGCA CTATCAAGAA
TTAGAAGAGC ACGTTAAGGG ACGGTTTGAT TTTGATTTTT CGATAGACTA TGAAACTGAC
CGTGGGCAAG CCCTACTCCT GAAGGTTGAG CAGTATTATC AAGAGTTACA AAAACGTTAT
GATAAGGAAG AGACAGATTA TATCCGATAT CAAGATGAGC TAGGTAAGGC TCAAAAAAAA
GCGACAGATT TGGCTAAAAC CTATCAAGAG GCCAAGGCAG TGCTTGACCA AGCTCAAGAA
CGCCTAGAGG ACTTGCAGGA AGCTCATCCA GAACTTGAGT CTGTTGAGGT ATATCAAGAA
CGGATTTCCC TTGCTCATCA GGAGCTGAAC CTCTACAATA AGCAAGTCAA GGAAAATAGC
GAAGCCTACA ACCAACTTCA TGCCGACATT AAAGGAATCA AGGGGCAGAT TGAGAGTATA
ACTAAGTCTA AAGATAAGGT AAATCAAGAT GTTAAGCGAT TATCTGCTGA ATTAGAGCAA
AGTCTCAAGG CTGAAGGAGC CCTCGCCAAT GACTTAGAGC AGGTCGAACT CTGGCTTATT
GAGGTAAATA ATCAAGCTAT TCCTATGCTT CAGGCCAAAT TAACGACCTA TGCAACGCTC
AAACAAGAAT TACAGGCGCA GATTCGTAAG GGGCAAGAGC TTCTCCAAAA TCAAGAACAA
CCAGATCTCG ATAGTCTAGC GCAAGCAGTA CAGAATTGTC AGGAAATCTA TGATAGGCAG
CTCGCTCAGT TTTCTGTCAT GGAAAAGGGA CTTAAGGATG CGACGGCTAC CTACCAAGCG
GCTAAAACCC TTCAAGACAG CAACCAAGAG GCCTTTAAGG CCCACCAAGA ACTCAGTGAT
TTGGTTAAGG TGGTTAAGGG AGAAAATACT GCTCTAACTG GTCGTCTTAA TCTTGAGGTC
TACGTTATCC GTCAGTATTT CCAACAAATC TTGGACTATG CCAATGCTAA CTACATCGGA
CTATTAACGG ATAACCGCTA TTCCTTTGTT CTAAGTGAGG AAGGACGCAG GGCGCGTGAT
CACTTCGGTT TGGATATCAA CGTCTATGAC CAGCTGACAG GTAGTGAACG CTCCGTTAAA
TCCTTGTCTG GTGGTGAAAC CTTTATCGCT GCACTGGCCA TTGCCCTATC CCTCTCAGAA
GTTGTCCAAA ATACCAGCAA GGGTGCCGTT GTTGAAGCAC TCTTCATCGA CGAAGGTTTC
GGTTCACTTG ATAAGGAAGC CCTCACTAAG GCTATCTCTG TCCTAGAACA AATCGGTGAA
AATCGCATGG TCGGTGTCAT CAGCCACGTG GACGATATGA AAGAAGGTAT TGCTCAGCAA
CTAGTTATCA TCAAGTCGCA CGATGGCAGT AGCCGTATTA AAATTGTGGA TAAGGGGTAG
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| Protein sequence | MRPVQLELTN FGPYRKEVIN FTQFDHAPLF LIGGDTGAGK STLFDAMTVA LFATTSGDRN
VEEMRSTFAG PEDDLTKVTF YFQQGNHLYR IDRVLQQERA KQGGGTTMQK ATASLVIVDK
IGGQEIEKLG DKIKEVSDQI EQILGLNAEQ FKQIILLPQN DFSRFLKEDS KTKTQILKKI
FGTGIFDRFQ KSLEERLRQS NKDMDKRQAQ IDSHFASQVW SEEELTVLAS TPASEKLARL
EEFLSQRQES LTEQKSILKA AHEDLAQLQK SFQTAQDLAK IFQELEQAKE RYRLEIEEGA
QGQAEAKVHL EELQFAQGLQ ETIRTLKQYR KQLMQLEQDL EIAQEALSEK QQAFEDVKAK
KEELAIQSED FLQKEEELET WKEDIIYSQS LAQEQEKIKR STTNYKQLEE TYQQARKEVE
MLNKSLSDLE ANRLSLESLH EAEKLFQIVG YSVENQLAQD LKEIENLNQE LTKTEKRHQT
LSFDIDQAQE ILKELEEELR RTLVSRRQLM IVQLQAELEE GHPCMVCGAL EHPNVGGAQA
DEVALKNLMD QVEKLQAQKE KQVATLSNRQ ATLSEVASKR QDLLDQVTKV KATLEKHYQE
LEEHVKGRFD FDFSIDYETD RGQALLLKVE QYYQELQKRY DKEETDYIRY QDELGKAQKK
ATDLAKTYQE AKAVLDQAQE RLEDLQEAHP ELESVEVYQE RISLAHQELN LYNKQVKENS
EAYNQLHADI KGIKGQIESI TKSKDKVNQD VKRLSAELEQ SLKAEGALAN DLEQVELWLI
EVNNQAIPML QAKLTTYATL KQELQAQIRK GQELLQNQEQ PDLDSLAQAV QNCQEIYDRQ
LAQFSVMEKG LKDATATYQA AKTLQDSNQE AFKAHQELSD LVKVVKGENT ALTGRLNLEV
YVIRQYFQQI LDYANANYIG LLTDNRYSFV LSEEGRRARD HFGLDINVYD QLTGSERSVK
SLSGGETFIA ALAIALSLSE VVQNTSKGAV VEALFIDEGF GSLDKEALTK AISVLEQIGE
NRMVGVISHV DDMKEGIAQQ LVIIKSHDGS SRIKIVDKG
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