| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1308 |
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| Symbol | |
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| ID | 4438083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1214105 |
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| End bp | 1214863 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639676930 |
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| Product | peptide ABC transporter ATPase |
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| Protein accession | YP_820683 |
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| Protein GI | 116628064 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000199498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACATTAC TAGATGTTCA ACATGTTAAA AAAATTTATA AAACGTGTTT CAAAGGAAAT
CAAGTTGAAG CCCTTAAAGA TATCCATTTT ACGGTTGATA AAGGTGACTA TGTTGCAATC
ATGGGTGAGT CCGGGTCAGG AAAATCAACC TTGCTTAATA TCCTTGCCAT GCTTGATAAA
CCAACAGCAG GGCGTGTCTA TCTGAATGGT ATGGACACAG CAAGAATTAA AAATAAGGAT
GCTTCCAGTT TCCGTCGTGA AAGATTAGGA TTTGTTTTCC AGGATTTCAA TCTTTTAGAT
ACCCTATCTG TTAAAGATAA TATCTTGCTA CCTTTGGTCC TTTCTCGATG CTCAGTTAAG
CAAATGATGA CACAAGTTGA AGCTATCAGT CGTCAACTGG GAATTCACTC TTTGCTAGAG
AAGTACCCTT ATGAAATTTC AGGTGGCCAA AAACAAAGGG TTGCAGTTGC GCGTGCGATC
ATCACTAAAC CAGAAATCCT CTTAGCAGAT GAGCCAACAG GCGCCTTGGA TTCCAAATCT
TCAGCGGCAC TCTTGGATGT CTTTGATACT ATTAATGCCA GCGGTCAGAC CATTCTTATG
GTAACTCACT CAACATCGGC CGCCAGTCGA GCGCAGCGTG TTTTGTTTAT CAAGGATGGT
ATTCTTTATA ATCAAATCTT CAAAGGGGAT AAGTCTGAAC ATCAAATGTT CCAAGAAATT
TCCGATACAC TTACAGTAAT GGCAAGTGAG GTGAACTAA
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| Protein sequence | MTLLDVQHVK KIYKTCFKGN QVEALKDIHF TVDKGDYVAI MGESGSGKST LLNILAMLDK
PTAGRVYLNG MDTARIKNKD ASSFRRERLG FVFQDFNLLD TLSVKDNILL PLVLSRCSVK
QMMTQVEAIS RQLGIHSLLE KYPYEISGGQ KQRVAVARAI ITKPEILLAD EPTGALDSKS
SAALLDVFDT INASGQTILM VTHSTSAASR AQRVLFIKDG ILYNQIFKGD KSEHQMFQEI
SDTLTVMASE VN
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