Gene STER_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1286 
Symbol 
ID4436925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1196605 
End bp1197426 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content40% 
IMG OID639676911 
ProductABC-type uncharacterized transport system, permease component 
Protein accessionYP_820664 
Protein GI116628045 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAT TGTGGCAACG TTATAAACCC TTTATTAATG CAGGTGTTCA GGAATTAATC 
ACCTACCGAG TCAATTTTAT TCTTTATCGG ATTGGGTATG TCATGGGAGC CTTTGTGGCC
TTTTATCTCT GGAAGGCAGT CTTTGATTCT TCCCAGGAGC CTTTGATTCA GGGCTTCAGT
ATGGCAGATA TTACCCTCTA CATCATCATG AGTTTTGTGA CCAATCTGTT GACCAGGTCT
GATAGCTCCT TTATGATTGG GGAGGGGGTA AAGGATGGTT CCATTATCAT GCGCTTATTA
AGATCAGTGC ATTTTTCGGC CTCTTATCTT TTTACCGAGC TTGGTTCCAA ATGGTTGATT
TTTATCTCTG TTGGCCTGCC ATTTTTGAAT GTGATTATTT TGATGAAAAT CTTGTCTGGA
CAAGGCATTG TAGAAGTGCT GGGATTGACG ATTCTTTATC TCTTTAGCTT AACGCTCGCC
TATCTGATTA ACTTTTTCTT TAATATCTGC TTTGGTTTTA CAGCCTTTGT GTTTAAAAAT
CTTTGGGTCC AATCTACTCA AGACTTCCAT AGTGGCCTTT ATGTCAGGAA GTCTGATTCC
CTTGGCTTTT TTTCCAAAGG TTGTTTCAGC TATTCTGTCA CTCTTGCCTT TTTCATCCTT
GATTTACACT CCGGTAATGA TTATTGTTGG GAAATACGAT GCCAGTCAGA TGCTTCAGGC
GCTTTTGCTC CAGTTTTTTG GCTCTTAGTG ATGGTGGGGC TTGTCTCAGT TGATTTGGAA
ACGAGTCCAG TCATTTATCA CCATTCAAGG AAGTTAGTAT GA
 
Protein sequence
MIKLWQRYKP FINAGVQELI TYRVNFILYR IGYVMGAFVA FYLWKAVFDS SQEPLIQGFS 
MADITLYIIM SFVTNLLTRS DSSFMIGEGV KDGSIIMRLL RSVHFSASYL FTELGSKWLI
FISVGLPFLN VIILMKILSG QGIVEVLGLT ILYLFSLTLA YLINFFFNIC FGFTAFVFKN
LWVQSTQDFH SGLYVRKSDS LGFFSKGCFS YSVTLAFFIL DLHSGNDYCW EIRCQSDASG
AFAPVFWLLV MVGLVSVDLE TSPVIYHHSR KLV