Gene STER_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1271 
Symbol 
ID4437795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1178950 
End bp1182483 
Gene Length3534 bp 
Protein Length1177 aa 
Translation table11 
GC content43% 
IMG OID639676897 
Productchromosome segregation SMC protein 
Protein accessionYP_820650 
Protein GI116628031 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTTGA AATCAATTGA AATGCAGGGC TTTAAGTCCT TTGCGGATAA GACGAAGGTC 
GTATTTGACA AAGGAGTAAC AGCGGTTGTA GGTCCAAATG GATCGGGAAA ATCAAATATT
ACAGAGAGCC TGCGTTGGGC ACTGGGCGAA TCCTCTGCAA AGAGTTTGCG TGGGGGTAAG
ATGCCAGATG TTATTTTCGC AGGTACAGAG GTCCGTAAAG CTCTTAACTA CGCGGAAGTA
GCGGTCACTC TTGATAACAG TGACGGCTTT ATCGCAGGTG TTGGTGAAAC CATTCGTGTG
GAACGTCATA TTTATCGAAA TGGTGACAAT GACTACTTGA TCAATGGTAG GAAGGTTCGT
CTGCGTGATA TTCGTGACCT CTTCATGGAT ACTGGTCTTG GGCGTGATTC TTTTTCTATT
ATTTCTCAAG GTCGTGTTGA GGCTATTTTT AATGCCAAAC CTGAGGATCG CCGTGCTATT
TTCGAGGAAG CTGCAGGTAT TCTTAAATAT AAGATACGTA AGAAAGAAAC CGAAAGCAAG
CTTAATCAAA CTCAGGATAA TCTTGATCGA TTGGAAGATA TCATCTATGA GCTAGATGGT
CAGGTTAAAC CACTTGAAAA GCAAGCAGCG ACAGCAAAAT GCTACTTAGA ACTCGATGGA
GAGCGTAGAC AGACCCTGCT TAACCTTTTA GTGCATGACA TTGAAGTTGG AAAATCTGAC
TTAACCCAAA CACAAGAAGA TTTGGCAGAG GTCAAGGACA AATTAACCAG CTATTATGAG
GAACGTCATC GTTTAGAGAC GGAGAACCAA GAACTCAAGC AAAAACGTCA CCAAATTTCA
GAACAAATTT CTTCTGACCA ACAAACCTTA GTAGATGTCA CACGACTTAT TAGTGACTTT
GAGCGTCAAA TTGATCTCTA TACCATGGAG AGTCAGCAGC GTTCCGAGAG AAAAGAAGAG
ACAGCAGCTC GTCTCAGCGA GCTAGAGAGT TTGAAAGCAG AAGCACAGGC TTCGCTTGAT
AAGGTTAACC AACGTCAAGT TAAATTGAAT GCTGAATTGA ATACTATTGC TCAGGAGCTG
ACTGCCATTC AAAAAGATCT GGAGCAATTT TCTGATGACC CAGATACGCT TATTGAACAT
TTGCGAGAAG ACTATGTCAG TCTTATGCAG GAGGAAGCTA AGGTTTCCAA CAGTCTAACT
CAGGTCACTC ACGACATGGA AAGTCAGACA CAAGCACTTG AGGCACAGGC TGAAGAATAT
AAACAGGCTC AAGCTGATTT GCTCTCTGCT CAGGAAGTAG CTAGCGAAGC TCAAAAGGCT
TATCAAGCAG CTCAAGCGAG TCTTCAAAAT CTCTTGGATA GCTACAAAGA GAAGGATCAG
TCTTATCAAG TCATCGATAA GGACTATCAA GAAGCTCAAA CGAAGATGTT TGACCTCATG
GATCACCTTA AGAGTAAAGA AGCTCGCCGT CAAAGTCTAG AGTCTATTCA AAAAAATCAT
AGTAATTTCT ATGCAGGGGT TAAGTCCGTT CTTCAAAATG CCCAATCCAT TCAGGGAATT
ATTGGCGCTG TTAGTGAACA CTTGACCTTT GATACGCGCT ATCAGACGGC TCTTGAAATT
GCAATGGGAA CTAGTGGGCA AAACATCATT GTTGAGGATG AAGCAGCAGC TAAGCGTTCG
ATTGATTACT TGAAACGTAA TCGTCAGGGT CGTGCGACTT TCTTACCATT GACAACCATC
AAACCACGTC AACTGAATGG GCAATTTGCT CAAATTCTTG CCAATGCACC TGGTTTCATT
GGTATGGCTT CCGATTTGGT CACTTACGAG GAACGTTTGG CTAATATTTT TCAAAACATC
TTAGGTGTAA CGGCAATCTT TAATACCATC GACAATGCCA ATAAGGCTGC TCGAGCTGTT
CGTTTTCAAG TACGTATGGT TACTCTTGAT GGCTCTGAAA TCCGCCCTGG TGGAGCCTTT
GCCGGTGGTG CCAATAAGCA AAATAATAGT CTCTTTATTA AGCCCGAACT AGATGCATTA
ACTACTGAAA TTAGCCAAAT TAAGGCTCAA TTAAGTGATA GTGAGGCTAA GGTTGAAGCC
CTTAAGACAA AGCGTAAGGC TTTACAGAAA GCGCTAGAAG ATCTCAAAGT TGATGGTGAA
AATGCTCGTC TGCAGGAGCA AAGGCTAGGC TTGGAGTATC AGCAAGCCTT ATCAGATGTA
GAGAAAAATC AAGTCTTGGT AGATAGTTTC AAGCAGGGTT CTCAGGGATC TGAAGGGGCA
AATCTTCAAA CTAAGTCTGA GCAACTTAAG GCAGAGTTAG CGCAAATTGC ATCTAAGCGT
GAGGCCATCA ATGACCGTAT CGAAGCAATT AAGGAAGATA AGGATGCCCT TGGCCAACAA
AAACAAGCTC TCTTAGACAG GCAATCTGAA CTCCAGTTGA AGGAGCGCGA CTTGCAAGCG
GAATTGCGTT TTGCTAAGAC AGAAAGTAAT CGTCTTCAAG CAGACTTGTC TGAATTAACG
AAGGAATCTG ACAGTCTCAA GGCTCTCCTC AATAACCAAG TCGATGAGGA TCAAACTGAT
CGTCTGCCGC AGTTACAAGC ACAGCATAAA GAAGCTGTTC AACGTAAAGA CGATTTGGAA
CAAGAACTTG TTCGTGCCAA GATTCAAGTG CAAGACTACG AAGGTCAGTT GGAGGACTTG
GAGGAGCGTT TGGCTAAAGC GGGGAACCGC AATGAAGATT TGATTCGTCA ACAGACTCGA
TTGGAAGAGC GTGAAAGTCA AATTAGTCAG TCGCTTCGTA AGTTTGCGAC TCAGTTGGCT
GAAGATTACC AGATGACGCT TGAAGCAGCC AAAGGTCAGG TTACCCCTCT TGAGAATGTT
GAGCAAACTC GCCAGAATCT TCAAAGTCTT GAGCGTTCGA TTAAGGCTTT GGGCCCTGTC
AATGTAGAGG CTATTGCTCA ATTTGAAGAA GTTAAGCAAC GTCTCGATTT CTTGAATGGT
CAAAAGGATG ATTTACTTGA AGCTAAGGGT CTCCTTCTGA ATACCATCAA TGATTTGGAT
GGTGAGGTGA AATCTCGCTT TAAAGCAACC TTCGAGACTA TCCGTGAAAG CTTTAAACAG
ACCTTTACCC AGATGTTTGG TGGTGGATCA GCAGATTTGA TTTTGACCTC AGATAATCTC
CTAGAGGCCG GTGTAGAAAT TTCTGTTCAG CCACCAGGTA AGAAAATTCA ATCACTTAAC
CTTATGTCAG GTGGTGAGAA GGCCTTGTCA GCTTTGGCTC TTCTCTTTGC CATCATTCGT
GTTAAGACTA TACCTTTTGT TATCCTAGAC GAAGTAGAAG CGGCTTTGGA TGAAGCCAAT
GTTAAACGCT TCGGTGACTA CCTCAATCGT TTTGACAAGT CTAGTCAATT TATCGTAGTT
ACCCACCGTA AGGGAACCAT GTCAGCAGCA GACTCTATTT ATGGGGTGAC AATGCAGGAA
TCTGGTGTCT CAAAAATTGT TTCAGTTAAA CTAAAAGACC TCGATTTTGA CTAA
 
Protein sequence
MYLKSIEMQG FKSFADKTKV VFDKGVTAVV GPNGSGKSNI TESLRWALGE SSAKSLRGGK 
MPDVIFAGTE VRKALNYAEV AVTLDNSDGF IAGVGETIRV ERHIYRNGDN DYLINGRKVR
LRDIRDLFMD TGLGRDSFSI ISQGRVEAIF NAKPEDRRAI FEEAAGILKY KIRKKETESK
LNQTQDNLDR LEDIIYELDG QVKPLEKQAA TAKCYLELDG ERRQTLLNLL VHDIEVGKSD
LTQTQEDLAE VKDKLTSYYE ERHRLETENQ ELKQKRHQIS EQISSDQQTL VDVTRLISDF
ERQIDLYTME SQQRSERKEE TAARLSELES LKAEAQASLD KVNQRQVKLN AELNTIAQEL
TAIQKDLEQF SDDPDTLIEH LREDYVSLMQ EEAKVSNSLT QVTHDMESQT QALEAQAEEY
KQAQADLLSA QEVASEAQKA YQAAQASLQN LLDSYKEKDQ SYQVIDKDYQ EAQTKMFDLM
DHLKSKEARR QSLESIQKNH SNFYAGVKSV LQNAQSIQGI IGAVSEHLTF DTRYQTALEI
AMGTSGQNII VEDEAAAKRS IDYLKRNRQG RATFLPLTTI KPRQLNGQFA QILANAPGFI
GMASDLVTYE ERLANIFQNI LGVTAIFNTI DNANKAARAV RFQVRMVTLD GSEIRPGGAF
AGGANKQNNS LFIKPELDAL TTEISQIKAQ LSDSEAKVEA LKTKRKALQK ALEDLKVDGE
NARLQEQRLG LEYQQALSDV EKNQVLVDSF KQGSQGSEGA NLQTKSEQLK AELAQIASKR
EAINDRIEAI KEDKDALGQQ KQALLDRQSE LQLKERDLQA ELRFAKTESN RLQADLSELT
KESDSLKALL NNQVDEDQTD RLPQLQAQHK EAVQRKDDLE QELVRAKIQV QDYEGQLEDL
EERLAKAGNR NEDLIRQQTR LEERESQISQ SLRKFATQLA EDYQMTLEAA KGQVTPLENV
EQTRQNLQSL ERSIKALGPV NVEAIAQFEE VKQRLDFLNG QKDDLLEAKG LLLNTINDLD
GEVKSRFKAT FETIRESFKQ TFTQMFGGGS ADLILTSDNL LEAGVEISVQ PPGKKIQSLN
LMSGGEKALS ALALLFAIIR VKTIPFVILD EVEAALDEAN VKRFGDYLNR FDKSSQFIVV
THRKGTMSAA DSIYGVTMQE SGVSKIVSVK LKDLDFD