Gene STER_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1260 
Symbol 
ID4437784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1168948 
End bp1169478 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content35% 
IMG OID639676888 
Producthypothetical protein 
Protein accessionYP_820641 
Protein GI116628022 
COG category[S] Function unknown 
COG ID[COG4720] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.575239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG ATAATACTCG TGAATTAGTT GAATTGAGTT TGTATGCAGC CTTGATTATT 
GTTACTGTAC AGTTTATTCG TATTCCTTTT GGACCACAAT TTGTCCATTT GGGAAATGCT
TTGGTTGTAA TTGCTATCTT AATTTTTGGT GCTAGAAAAG GTGCGTTAGT TGCAACGGTA
GCATTAGGGC TATTTGATAT TTTTAATGGC TATGCTGCTG AGGTTTGGAT TACTATTTTA
GAATCTTTGA TTGTCTGTTT GGTGCTCTAT CTTGTTTTTG AAAAGCTCCT AAAATCAAAT
GATAAAATAG TTAACGTCAT TATCGCTGGA GTGATCGCTG CATTGACCAA AATTATTTTG
AATTTCCTTA AGTATACGAT TATTAATACC ATCGTTGCGT CCCTCCCCTT AAAAGCTGCC
ATGCTAGCTT CAGTGATCAA GATTGGTGGA ACTTTTGGAA CATCAGTTGT TACAATCATT
GCGGTTCCTC TTTTATATCC TGTCTTCAAA CGCATTTTTA AAAAAGACTA A
 
Protein sequence
MKNDNTRELV ELSLYAALII VTVQFIRIPF GPQFVHLGNA LVVIAILIFG ARKGALVATV 
ALGLFDIFNG YAAEVWITIL ESLIVCLVLY LVFEKLLKSN DKIVNVIIAG VIAALTKIIL
NFLKYTIINT IVASLPLKAA MLASVIKIGG TFGTSVVTII AVPLLYPVFK RIFKKD