| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1237 |
|---|
| Symbol | |
|---|
| ID | 4436953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1140859 |
|---|
| End bp | 1142778 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639676868 |
|---|
| Product | ABC transporter ATPase |
|---|
| Protein accession | YP_820621 |
|---|
| Protein GI | 116628002 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0857839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTT TACAAGGAAA TAAAATTGAG CGCTCTTTCT CAGGAGATGT GCTCTTTGAT
AATATTAATA TTCAGGTGGA TGAACGTGAT CGTATTGCTT TGGTTGGGCG CAACGGTGCT
GGAAAATCAA CCTTGTTGAA AATTTTGGTT GGAGAGGAAG CACCGACAAG TGGTGAAATC
AACACAAAAC GTGATTTGAA CCTTTCTTAC TTAGCTCAGG ACAGTCGTTT TGAGTCTAGT
AATACCATCT ATGAGGAAAT GTTGAATGTC TTTTCAGACC TACGTGCAGA TGAAAAACGT
CTGCGTGACA TGGAAATGAA GATGGCTGAG TTAACTGGGG AAGACTTGAA TAAGCTAATG
ATAGACTATG ATAGACTTTC CGAGGATTTC AGACAGCGCG GTGGTTTTAC CTATGAATCT
GACATCAGAG CTATTCTCAA TGGTTTTAAG TTTGATGAAA GCATGTGGGG GATGCCTATT
TCAGATCTCT CTGGTGGCCA AAATACCCGT TTGGCCTTGG CTAAAATGCT TCTAGAGAAG
CCTGAGCTTT TGGTACTGGA CGAACCGACC AACCACTTGG ATATTGAGAC TATCACTTGG
TTGGAGAATT ACTTAGTCAA TTATCAGGGA GCTCTAATCA TTGTCAGTCA CGACCGTTAT
TTCTTGGATA AGGTGGCGAC AGTAACCCTA GATTTGACCA AACATAGTTT AGATCGTTAT
GTCGGGAACT ATTCAAAATT CATGGACTTA AAAGCTGAGA AGTTGGCCAC CGAAGCCAAG
AATTTCGAAA AGCAACAAAA GGAAATTGCT AAGCTGGAGG ACTTTGTTAA TCGTAATATT
GTTCGTGCCT CTACAACCAA ACGTGCTCAG GCCCGTCGCA AACAGCTGGA GAAAATTGAA
CGTCTAGATA AGCCAACAGA AGGCCAGAAG TCTGCTAATA TGACTTTTCA TGTGGACAAG
GTATCTGGGA ATGTGGTCTT GACAGTTAGG AATGCTGCTA TTGGTTACGA TAATGAGATT
CTCTCGGAGC CTATTTCTCT GGATGTTAAA AAAATGGATG CTATCGCCAT TGTGGGTCCA
AATGGAGTCG GGAAAACGAC CTTTATTAAG TCGGTAGTAG GTAAATTGCC ATTTATCAAG
GGATCATCAA CCTACGGTGC GAATGTTGAA GTGGGTTATT ATGACCAAAC ACAATCAGCC
TTGACACCAT CAAACACTGT ACTTGATGAG TTGTGGAATG ATTTTCCGAC AACTCCTGAA
GTTAAGATTC GTAACCGTCT GGGAGCTTTT CTCTTCTCAG GTGATGATGT CAAAAAGTCA
GTTTCCATGC TTTCTGGTGG TGAGAAAGCT CGTCTGCTCC TAGCCAAATT GTCAATGGAA
AATAATAACT TTCTAATCCT GGATGAGCCA ACCAACCACT TGGATATTGA TAGTAAGGAA
GTATTGGAAA ATGCTCTTAT TGACTTTGAT GGAACACTTC TCTTTGTCAG CCACGATCGT
TACTTTATCA ACCGTGTGGC AACAAAAGTG ATGGAAATCT CTGAGGATGG AGCAACTATT
TATCTTGGAG ATTACGATTA CTATCTTGAA AAGAAGGCGG AGCTTGAAGA ATTAGCACGA
CTTGAAGCGG AAGAAAATCA AGGTCCAGAG GAGACCCAAG TAGCTTCAGC GGGTGCTAGT
GATTATCAAG CTCAAAAAGC TAGTCAAAAA GAGATCCGTA AACTGAGCCG ACGTATTGAG
CAAATCGAAA ATGAATTAGA AACCGTCGAA GAACGCTTGG GAAAAATTTC TATTGCTATG
CTTGAAACCA ATGATGTGAT GGAATTGTCT GACTTGCAGA AAGAACTAGA CGACTTATCA
GTCAATCAAG AGGCTCTGAT GGAAGAGTGG AGTGATCTTT CGGAACAGTT GGAACGTTAA
|
|---|
| Protein sequence | MIILQGNKIE RSFSGDVLFD NINIQVDERD RIALVGRNGA GKSTLLKILV GEEAPTSGEI
NTKRDLNLSY LAQDSRFESS NTIYEEMLNV FSDLRADEKR LRDMEMKMAE LTGEDLNKLM
IDYDRLSEDF RQRGGFTYES DIRAILNGFK FDESMWGMPI SDLSGGQNTR LALAKMLLEK
PELLVLDEPT NHLDIETITW LENYLVNYQG ALIIVSHDRY FLDKVATVTL DLTKHSLDRY
VGNYSKFMDL KAEKLATEAK NFEKQQKEIA KLEDFVNRNI VRASTTKRAQ ARRKQLEKIE
RLDKPTEGQK SANMTFHVDK VSGNVVLTVR NAAIGYDNEI LSEPISLDVK KMDAIAIVGP
NGVGKTTFIK SVVGKLPFIK GSSTYGANVE VGYYDQTQSA LTPSNTVLDE LWNDFPTTPE
VKIRNRLGAF LFSGDDVKKS VSMLSGGEKA RLLLAKLSME NNNFLILDEP TNHLDIDSKE
VLENALIDFD GTLLFVSHDR YFINRVATKV MEISEDGATI YLGDYDYYLE KKAELEELAR
LEAEENQGPE ETQVASAGAS DYQAQKASQK EIRKLSRRIE QIENELETVE ERLGKISIAM
LETNDVMELS DLQKELDDLS VNQEALMEEW SDLSEQLER
|
|---|
| |