Gene STER_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1233 
Symbol 
ID4436749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1134898 
End bp1136223 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content42% 
IMG OID639676864 
ProductMur ligase family protein 
Protein accessionYP_820617 
Protein GI116627998 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.198792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATCT TGGCAGGTAA AGCTAGTCAC TTTGTTCTCT CAAAATTGGG ACGTGGCTCA 
ACCCTCCCAG GAAAAATCGC CCTTAAATTT GATAAAGATA TTTTAGACAC ACTAGCTAAA
GATTATGAAA TCGTCGTTGT CACTGGTACC AACGGTAAGA CTCTGACAAC CGCTTTGACA
GTCGGTATTC TAAAAGAAGC TTACGGTGAA ATTGTAACTA ACCCTAGTGG AGCCAACATG
ATCACTGGGA TTACTTCCAC CTTTCTAACT GCTAAAAGAG CTAAATCTGG TAAGAAAATC
GCTGTCTTGG AGATTGATGA AGCCAGCCTT CCAAAAATCA CTGAGTATAT CACTCCAAGT
CTTTTTGTCT TCACAAATAT TTTCCGTGAC CAAATGGACC GTTATGGTGA AATTTACACC
ACTTATCAGA TGATTTTAGA TGGTGCTGCT AAGGCGCCAG CGGCAACTAT TTTGGCTAAC
GGGGACAGTC CTCTTTTTAA TTCTAAAGAG CTAGTCAATC CCGTACGTTT CTATGGTTTT
GACACTGAAA AACATGCGCC AGAGCTTACA CACTATAATA CTGAAGGAAT TGTGTGTCCT
AAGTGCGAGA ACATTCTTCA GTATCACCTT AATACTTACG CTAACTTAGG TGACTATGTG
TGCCTTAACT GTGACTTTCA CCGTCCAGAA TTAGATTATA AGCTAACGCA GCTGACAAAA
ATCACCAACA CCACTTCTGA ATTTATCATT GACGGTCAAG ATTACAAGAT TAACGTTGGG
GGGCTCTACA ACATCTATAA TGCCCTTGCT GCCGTTTCTG TCGCTGAATT CTTCGGCGTT
GTGCCAGAGC AAATCAAAGC TGGTTTTGAT AAGAGTCGTG CTGTCTTTGG ACGTCAAGAA
ACCTTTAAAA TTGGTGATAA ATCATGTACT CTCGTACTGA TTAAGAATCC AGTTGGAGCT
AGCCAAGCTC TGGATATGAT TAAACTTGCA GACCATCCAT TTAGCTTGTC AGTCCTTCTT
AATGCCAACT ATGCTGATGG TATTGACACC AGCTGGATTT GGGATGCCAA CTTTGAAAGC
ATTCTCGATA TGGATATTCC TGAAATTAAT GCTGGTGGTG TCCGTCACTC TGAAATTGCC
CGTCGTCTGC GTGTAACTGG CTATCCAGAG GACAAAATTA CACAAGCAGA AAAACTCGAA
GATATTATGA CCCTGATTGA AAAGCAAGAC TGCGACCACG CCTATATCTT AGCGACCTAT
ACTGCCATGC TTGAATTCCG TGATATTCTG GCCCAACGTC ATGCTGTCGG AAAGGGGATG
AACTAA
 
Protein sequence
MGILAGKASH FVLSKLGRGS TLPGKIALKF DKDILDTLAK DYEIVVVTGT NGKTLTTALT 
VGILKEAYGE IVTNPSGANM ITGITSTFLT AKRAKSGKKI AVLEIDEASL PKITEYITPS
LFVFTNIFRD QMDRYGEIYT TYQMILDGAA KAPAATILAN GDSPLFNSKE LVNPVRFYGF
DTEKHAPELT HYNTEGIVCP KCENILQYHL NTYANLGDYV CLNCDFHRPE LDYKLTQLTK
ITNTTSEFII DGQDYKINVG GLYNIYNALA AVSVAEFFGV VPEQIKAGFD KSRAVFGRQE
TFKIGDKSCT LVLIKNPVGA SQALDMIKLA DHPFSLSVLL NANYADGIDT SWIWDANFES
ILDMDIPEIN AGGVRHSEIA RRLRVTGYPE DKITQAEKLE DIMTLIEKQD CDHAYILATY
TAMLEFRDIL AQRHAVGKGM N