| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1201 |
|---|
| Symbol | |
|---|
| ID | 4438703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1108788 |
|---|
| End bp | 1109507 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639676834 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_820587 |
|---|
| Protein GI | 116627968 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTC TACCAGCAAT TGATATTAAG GATGGACAGG CAGTTCGTCT CTTCAAAGGA
GATTTCAACC AAAAAACCGT CGTCAATCCA GATATTATTG AGCAAGCAAA GACTTTTAAG
AATGCGGGCA TCCAATTCAT TCACCTTGTT GACTTGGATG GTACTCTTGA TGGTCGTGCC
ACTAACCGTG ACTTGATTAC AGAGGTCAAG AAGATTTCTG GACTTGGCAT CGAAGTTGGT
GGCGGTATCC GCACCTTGGA GCAGATTCGT GACTATTTGG CAGTTGGCAT CGACCGTATC
ATTATCGGTT CAATGGCCGT CAAAGATCCT GACTTCGTTA GAGCAGCTTT GGAGGAATTT
GGTGCCGATA GGATTGTCGT GGGTATAGAT GCCAAGGCAG GTCTTGTCGC TACAGAAGGT
TGGTTGGAAA CCAGTAATGT GGACTACATC ACCTTGGCCA AGGAAATGGA AAAAATGGGC
GTAACCCTCT TTATTTATAC AGACGTTGAT CGAGATGGCA CACTGACAGG ACCCAATCTT
GATCACTACA AATGTTTGGT ATCTGAACTC ACAACCGCTA AAGTCATCGC TTCAGGTGGG
GTTGCAGAGC TAGCCGACTT AAATCACTTA CAAGAGATTG GTGTAGCAGG AACCATTGTC
GGTAAGGCCT ACTATAACGG CAATATCACT TTAGACCAGC TCAAGTCTTT CGGAGGTTAA
|
|---|
| Protein sequence | MQILPAIDIK DGQAVRLFKG DFNQKTVVNP DIIEQAKTFK NAGIQFIHLV DLDGTLDGRA
TNRDLITEVK KISGLGIEVG GGIRTLEQIR DYLAVGIDRI IIGSMAVKDP DFVRAALEEF
GADRIVVGID AKAGLVATEG WLETSNVDYI TLAKEMEKMG VTLFIYTDVD RDGTLTGPNL
DHYKCLVSEL TTAKVIASGG VAELADLNHL QEIGVAGTIV GKAYYNGNIT LDQLKSFGG
|
|---|
| |