Gene STER_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1187 
Symbol 
ID4438283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand- 
Start bp1095120 
End bp1095764 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content39% 
IMG OID639676820 
Productendonuclease III, DNA repair 
Protein accessionYP_820573 
Protein GI116627954 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00300969 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGGTA GAAAACGTGT TAATGAAGCT CTGGCCTTAA TGGGAAAGAT GTTTCCAGAT 
GCACATGGTG AGCTGGAGTG GGAGACTCCC TTTCAACTAC TAGTTGCTGT TATTTTATCT 
GCTCAAACAA CTGACAAAGC TGTTAATAAG GTAACACCGG GTTTGTGGGC CCGTTATCCA 
GAAATTGAAG ATTTAGCATC TGCTAATCTT GATGATGTTG AAATGTGCTT AAGAACCATT 
GGGCTATATA AGAATAAGGC AAAGAATATC ATCAAAACTG CTAGAGCTAT TTTAATGAAT 
TTCGACGGAC AAGTTCCCAA AACTCACAAG GAATTAGAGA GTCTACCTGG TGTTGGACGA 
AAAACAGCTA ACGTCGTATT GGCTGAAGTC TATGGTATTC CGTCTATTGC TGTAGATACA 
CATGTCTCTC GCGTTTCTAA ACGGCTGAAT ATAGCTCCAG AAAATGCTAG TGTAGAGGAA 
ATCGAAGCAG AATTGATGAA GAAAATACCA AAGAAAGATT GGATTATCAG TCATCACCGC 
ATGATTTTCT TTGGACGCTA TCATTGTTTA GCAAAGAATC CTAAATGCCA GACTTGTCCT 
CTTCAAAGTT ACTGTAAGTA TTATCGAGAA ACAACTAAGA AATAA
 
Protein sequence
MLGRKRVNEA LALMGKMFPD AHGELEWETP FQLLVAVILS AQTTDKAVNK VTPGLWARYP 
EIEDLASANL DDVEMCLRTI GLYKNKAKNI IKTARAILMN FDGQVPKTHK ELESLPGVGR 
KTANVVLAEV YGIPSIAVDT HVSRVSKRLN IAPENASVEE IEAELMKKIP KKDWIISHHR 
MIFFGRYHCL AKNPKCQTCP LQSYCKYYRE TTKK