Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1182 |
Symbol | |
ID | 4438278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 1091629 |
End bp | 1092501 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639676815 |
Product | geranyltranstransferase, farnesyl diphosphate synthase |
Protein accession | YP_820568 |
Protein GI | 116627949 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGC TAAAAAAAAT TGATGCTGCT ATACGGGATT TTTATCAAAA GAAAACCCCA CCAGTATCAA GCGATTTAAT CTCTGCTATT CTTTATTCAG TTGATAGTGG CGGTAAGCGT ATCCGTCCAC TGATTTTCTT GGATTTACTT GAAGGATTTG GTTTAGAGTT AACTCCCAGT CATTTTGATA TTGCAGCAAG TCTTGAAATG ATTCATACCG GGAGTCTGAT TCACGACGAT TTACCGGCAA TGGACGATGA TGATTACCGT CGAGGACGTC TAACAAACCA TAAAAAATTT GATGAAGCAA CGGCAATTTT AGCTGGTGAT TCTCTCTTTT TAGATCCCTT TGCACTTGTA GCTCAAACAG AGCTTTCTGC AGAGATTCGT GTTCAATTGA TTCACGCTCT ATCTCATGCG TCAGGGACCT TCGGTATGGT TGGTGGTCAG ATGTTGGATA TGAAAGGTGA AGGTCTGGAA CTTGATTTAT CGCAACTGGC TAAGATTCAC GAGAATAAGA CTGGTAAGCT TCTAACCTTT CCTTTTGTAG CGGCTGGTAT TGTGGCCCAA CAAGAAGATC GAGTCATGGA AAATCTTCAA GAAGCTGGTC GCTTGATTGG TCTTGCCTTT CAAGTTCGTG ATGACATTTT AGATGTGACT GCTGACTTTG AATCCTTAGG AAAAACGCCT GGAAAAGATG TGGTCGCTGG GAAATCAACC TACCCTGCTC TTCTTGGTTT GGAAAAATCA TATGCCATTC TCGAGGAATC ACTAAATAAG GCTGAGGCCA TTTTCAAAGA CTTGGCTGAG TACCAAGGTT TCAAGCAAGA CAATATTATG AAAATCATAG AAAGGTTAAG ATTCCATGCC TAA
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Protein sequence | MTKLKKIDAA IRDFYQKKTP PVSSDLISAI LYSVDSGGKR IRPLIFLDLL EGFGLELTPS HFDIAASLEM IHTGSLIHDD LPAMDDDDYR RGRLTNHKKF DEATAILAGD SLFLDPFALV AQTELSAEIR VQLIHALSHA SGTFGMVGGQ MLDMKGEGLE LDLSQLAKIH ENKTGKLLTF PFVAAGIVAQ QEDRVMENLQ EAGRLIGLAF QVRDDILDVT ADFESLGKTP GKDVVAGKST YPALLGLEKS YAILEESLNK AEAIFKDLAE YQGFKQDNIM KIIERLRFHA
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