Gene STER_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1182 
Symbol 
ID4438278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1091629 
End bp1092501 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content41% 
IMG OID639676815 
Productgeranyltranstransferase, farnesyl diphosphate synthase 
Protein accessionYP_820568 
Protein GI116627949 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGC TAAAAAAAAT TGATGCTGCT ATACGGGATT TTTATCAAAA GAAAACCCCA 
CCAGTATCAA GCGATTTAAT CTCTGCTATT CTTTATTCAG TTGATAGTGG CGGTAAGCGT
ATCCGTCCAC TGATTTTCTT GGATTTACTT GAAGGATTTG GTTTAGAGTT AACTCCCAGT
CATTTTGATA TTGCAGCAAG TCTTGAAATG ATTCATACCG GGAGTCTGAT TCACGACGAT
TTACCGGCAA TGGACGATGA TGATTACCGT CGAGGACGTC TAACAAACCA TAAAAAATTT
GATGAAGCAA CGGCAATTTT AGCTGGTGAT TCTCTCTTTT TAGATCCCTT TGCACTTGTA
GCTCAAACAG AGCTTTCTGC AGAGATTCGT GTTCAATTGA TTCACGCTCT ATCTCATGCG
TCAGGGACCT TCGGTATGGT TGGTGGTCAG ATGTTGGATA TGAAAGGTGA AGGTCTGGAA
CTTGATTTAT CGCAACTGGC TAAGATTCAC GAGAATAAGA CTGGTAAGCT TCTAACCTTT
CCTTTTGTAG CGGCTGGTAT TGTGGCCCAA CAAGAAGATC GAGTCATGGA AAATCTTCAA
GAAGCTGGTC GCTTGATTGG TCTTGCCTTT CAAGTTCGTG ATGACATTTT AGATGTGACT
GCTGACTTTG AATCCTTAGG AAAAACGCCT GGAAAAGATG TGGTCGCTGG GAAATCAACC
TACCCTGCTC TTCTTGGTTT GGAAAAATCA TATGCCATTC TCGAGGAATC ACTAAATAAG
GCTGAGGCCA TTTTCAAAGA CTTGGCTGAG TACCAAGGTT TCAAGCAAGA CAATATTATG
AAAATCATAG AAAGGTTAAG ATTCCATGCC TAA
 
Protein sequence
MTKLKKIDAA IRDFYQKKTP PVSSDLISAI LYSVDSGGKR IRPLIFLDLL EGFGLELTPS 
HFDIAASLEM IHTGSLIHDD LPAMDDDDYR RGRLTNHKKF DEATAILAGD SLFLDPFALV
AQTELSAEIR VQLIHALSHA SGTFGMVGGQ MLDMKGEGLE LDLSQLAKIH ENKTGKLLTF
PFVAAGIVAQ QEDRVMENLQ EAGRLIGLAF QVRDDILDVT ADFESLGKTP GKDVVAGKST
YPALLGLEKS YAILEESLNK AEAIFKDLAE YQGFKQDNIM KIIERLRFHA