| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1107 |
|---|
| Symbol | |
|---|
| ID | 4437341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1021966 |
|---|
| End bp | 1024650 |
|---|
| Gene Length | 2685 bp |
|---|
| Protein Length | 894 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639676742 |
|---|
| Product | cation transport ATPase |
|---|
| Protein accession | YP_820496 |
|---|
| Protein GI | 116627877 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGAAAG AACAAAGTAA AGCCTTGTTT TACACGCAAG GAGTGGAAGA AGTCCTAAAA
AGCTTGGACA CTTCCATTGA TGGTTTGTCT ACTGCACAAG CCAAGGAACG TTTAGATGCC
TATGGCTATA ATGAGTTGGA TGAAGGTGAA AAACGTAGCC TTTTATCAAA ATTCATCGAC
CAGTTTAAAG ATTTGATGAT CATCATCTTG CTTGTCGCTG CTGCCCTTTC TATCATTACA
GAAGGCAGGC ATGGTTTGAC GGATGCCTGT ATTATTTTTG CCGTTGTTGT TTTGAATGCA
GCCTTTGGTG TTTATCAAGA GGGGCAAGCA GAAGCGGCTA TTGAAGCTCT TAAAAACATG
TCAAGTCCAA TGGCTCGTGT GCGCCGTGAT GGTAATGTAG TTGAAATTGA TTCACGTGAA
TTGGTTCCAG GAGACATTGT TTTGCTTGAA GCAGGTGATG TTGTTCCGGC AGATATGCGT
TTGATCGAAG CTGCCTCACT TAAGATTGAA GAAGCTGCCC TTACTGGTGA ATCCGTTCCA
GTTGAAAAAG ATATTACCGA GACGGTTGAA GCAGAAGCCG GAATTGGTGA CCGTGTGAAT
ATGTGTTACC AAAACTCAAA CGTTACTTAC GGTCGTGGTA CTGGTGTAGT AACCAATACT
GGTATGTATA CTGAAGTTGG TAAGATTGCT GATATGCTAG CTAATGCGGA CGAATCACAA
ACGCCGTTGA AGCAAAGCTT GGAGCAATTG TCTAAGACTT TGACTTACCT TATTATTGCT
ATTGCCTTGG TGACATTCTT GGTTAGTGTA TTTATTCGTG GCGAACAGCC CCTTGAAGGT
TTGATGGTTG CAGTTGCTCT TGCCGTTGCA GCTATTCCTG AAGGATTGCC TGCCATTGTA
ACGATTCTCT TGTCACTTGG AACAACGACT CTTGCCAAAC GCAATGCGAT TGTTCGTAAA
TTGCCAGCAG TTGAAACCCT AGGTTCAACT GAAATTATCG CATCTGATAA GACTGGTACC
TTAACGATGA ACCAGATGAC TGTTGAAAAA GTCTATACAA ACGGTCAATT GCAAAATGCT
GATACAGAAC TTGGTGCTGA CAATACGACC CTTCGTATTA TGACCTTTGC TAATGATACA
AAGGTGGATC CAGATGGTAA ATTAATCGGA GACCCAACAG AAACAGCACT TGTACAGTTT
GGTTTAGATC ACAATTTTGA TGTTCGTGAA GTCTTGAAAT CAGAGCCTCG TGTGGCAGAG
TTGCCATTTG ACTCTGACCG TAAGCTCATG TCTACTATCC ATAAGGAACC AGATGGTTCT
TACTTTGTAG CCGTCAAGGG TGCACCTGAC CAATTGATCA AGCGTGTTAC TCGAATTGAA
ATCAATGGAG AAGTTCGCCC AATTACGGAT GAAGACAAAC AAGCTATCCT TGCTGTCAAC
AAAGACTTAG CAAAACAAGC CCTTCGTGTC TTGATGATGG CTTATAAGAC AACAAGTGAA
ATTCCTATTT TGGAATCTGA AGTTGTTGAG TCTGATTTGA TTTTCTCTGG TTTGGTTGGG
ATGATTGACC CAGAACGTCC TGAAGCAGCA GAAGCTGTCC GTGTCGCTAA AGAGGCGGGA
ATCCGTCCAA TTATGATTAC AGGTGACCAC CAAGATACAG CGGAAGCAAT CGCTAAGCGT
CTCGGTATCA TTGATCCAAA TGATACGGAA GATCGTGTCA TTACTGGGGC TGAGCTTAAT
GAGCTTTCTG ATGAGGAATT CCAGAAAGTC TTCAAACAGT ACTCAGTTTA TGCGCGTGTG
TCTCCTGAAC ACAAGGTTCG TATCGTTAAG GCTTGGCAAA ATGAGGGCAA GGTTGTTGCT
ATGACAGGTG ACGGGGTCAA TGATGCGCCA TCACTTAAGA CAGCTGATAT TGGTATCGGT
ATGGGGATTA CAGGTACAGA GGTTTCTAAG GGAGCTTCTG ATATTGTTCT TGCCGATGAT
AACTTTGCGA CAATTATCGT TGCTGTAGAA GAAGGTCGAA AGGTCTTCTC CAATATTCAA
AAATCAATCC AGTACCTCTT GTCAGCTAAC ATGGCCGAAG TCTTTATTAT CTTCTTTGCT
ACATTATTTG GATGGGATGT GCTTCAACCA GTGCACCTTC TCTGGATTAA CTTAGTAACA
GATACCCTTC CAGCCATCGC TCTTGGTGTT GAGCCAGCTG AACCAGGTAT TATGACTCAC
AAACCTCGTG GACGTCAATC AAACTTCTTT GATGGTGGGG TCTTTGGTGC TATCATGTAT
CAAGGTGTTT TCCAAACTAT CCTGGTTCTT GCAGTATATG GTTGGGGTCT TGTTTTCCCA
GAACATCATA CACAAGCAGA AATTCATGCA GATGCCCTTA CAATGGCCTA TGCAACACTT
GGATTGATTC AGTTGCTTCA TGCCTTTAAC GTTAAGTCTG TTTATCAATC AGTCTTTAAA
GTTGGTCTCT TTAGAAACAA GACATTTAAC TGGGCAATTC CAGTTGCCTT CATCCTCTTG
ATGGCAACTA TCGTGGTTCC TGGGTTGAAT AATCTCTTCC ATGTGTCACA TCTAAGTTTT
ACACAATGGC TTGCGGTTAT TGTAGGTTCA TTCTTGATTG TGGTTTTGGT TGAAATAGTC
AAAGCTATTC AACGTGCCCT TGGTAAGGAT AAAGACGCTA TTTAA
|
|---|
| Protein sequence | MSKEQSKALF YTQGVEEVLK SLDTSIDGLS TAQAKERLDA YGYNELDEGE KRSLLSKFID
QFKDLMIIIL LVAAALSIIT EGRHGLTDAC IIFAVVVLNA AFGVYQEGQA EAAIEALKNM
SSPMARVRRD GNVVEIDSRE LVPGDIVLLE AGDVVPADMR LIEAASLKIE EAALTGESVP
VEKDITETVE AEAGIGDRVN MCYQNSNVTY GRGTGVVTNT GMYTEVGKIA DMLANADESQ
TPLKQSLEQL SKTLTYLIIA IALVTFLVSV FIRGEQPLEG LMVAVALAVA AIPEGLPAIV
TILLSLGTTT LAKRNAIVRK LPAVETLGST EIIASDKTGT LTMNQMTVEK VYTNGQLQNA
DTELGADNTT LRIMTFANDT KVDPDGKLIG DPTETALVQF GLDHNFDVRE VLKSEPRVAE
LPFDSDRKLM STIHKEPDGS YFVAVKGAPD QLIKRVTRIE INGEVRPITD EDKQAILAVN
KDLAKQALRV LMMAYKTTSE IPILESEVVE SDLIFSGLVG MIDPERPEAA EAVRVAKEAG
IRPIMITGDH QDTAEAIAKR LGIIDPNDTE DRVITGAELN ELSDEEFQKV FKQYSVYARV
SPEHKVRIVK AWQNEGKVVA MTGDGVNDAP SLKTADIGIG MGITGTEVSK GASDIVLADD
NFATIIVAVE EGRKVFSNIQ KSIQYLLSAN MAEVFIIFFA TLFGWDVLQP VHLLWINLVT
DTLPAIALGV EPAEPGIMTH KPRGRQSNFF DGGVFGAIMY QGVFQTILVL AVYGWGLVFP
EHHTQAEIHA DALTMAYATL GLIQLLHAFN VKSVYQSVFK VGLFRNKTFN WAIPVAFILL
MATIVVPGLN NLFHVSHLSF TQWLAVIVGS FLIVVLVEIV KAIQRALGKD KDAI
|
|---|
| |