Gene STER_1102 details

Gene Information

• Locus tag: STER_1102
• Symbol: prfB
• ID: 4437336
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: -
• Start bp: 1017867
• End bp: 1018880
• Gene Length: 1014 bp
• Protein Length: 337 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 639676737
• Product: peptide chain release factor 2
• Protein accession: YP_820491
• Protein GI: 116627872
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.437069
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAGAGG ACATTGCGCT CCTTGAAAAC CGAATGACTG AGCCAGATTT TTGGAATGAT 
AATATTGCGG CTCAAAAGAC CTCTCAAGAG TTAAATGAGC TCAAAATGAA ATATGAAACT 
TTCAACAACA TGAAAGAGCT CTCTGACGAG ACAGAGCTTT ATTTGGAAAT GTTGGAAGAA 
GATGATAGCG TTCAAGAGGA ACTCGAAGAA ACACTTGAAA AACTTGATAA GATTATGACA 
AGTTACGAGA TGACGTTGCT TTTGTCTGAG CCATATGACC ATAACAATGC CATTCTTGAA 
ATTCATCCAG GATCTGGTGG AACTGAAGCT CAGGACTGGG CAGAAATGTT ACTCCGTATG 
TACCAGCGTT ATGGAAATGC CAAAGGTTTC AAAGTTGAGA CTTTGGATTA TCAGGCTGGT 
GATGAGGCTG GAATCAAATC TGTAACTCTT GCTTTTGAGG GACCTAATGC ATATGGATTC 
CTCAAGTCAG AAATGGGTGT TCACCGTTTG GTTCGTATCT CACCATTTGA CTCTGCTAAG 
CGTCGTCACA CTTCATTTAC ATCAGTGGAA GTCATGCCTG AATTAGATGA TACCATTGAA 
GTCGAAATCC GTGATGACGA TATCAAGATG GATACTTTCC GATCAGGTGG TGCAGGTGGT 
CAGAACGTCA ATAAGGTTTC TACCGGTGTG CGTTTGACTC ACATTCCAAC AGGTATTGTT 
GTAGCTTCTA CGGTTGACCG TACACAATAC GGAAACAGAG ACCGTGCTAT GAAGATGCTT 
CAAGCTAAGC TCTATCAAAT GGAGCAAGAA AAAAAAGCAG AAGAAGTGAA TGCCTTGAAA 
GGTGATAAGA AAGAAATCAC TTGGGGAAGT CAAATTCGCT CATATGTTTT CACCCCATAT 
ACCATGGTTA AAGATCACCG TACAGGCTAT GAAGTTGCCC AGGTTGATAA AGTAATGGAT 
GGGGATATTG AAGGTTTCAT CGATGCCTAC CTCAAGTGGC GTATGGAAGA ATAG 

 

Protein sequence

MEEDIALLEN RMTEPDFWND NIAAQKTSQE LNELKMKYET FNNMKELSDE TELYLEMLEE 
DDSVQEELEE TLEKLDKIMT SYEMTLLLSE PYDHNNAILE IHPGSGGTEA QDWAEMLLRM 
YQRYGNAKGF KVETLDYQAG DEAGIKSVTL AFEGPNAYGF LKSEMGVHRL VRISPFDSAK 
RRHTSFTSVE VMPELDDTIE VEIRDDDIKM DTFRSGGAGG QNVNKVSTGV RLTHIPTGIV 
VASTVDRTQY GNRDRAMKML QAKLYQMEQE KKAEEVNALK GDKKEITWGS QIRSYVFTPY 
TMVKDHRTGY EVAQVDKVMD GDIEGFIDAY LKWRMEE