Gene STER_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1069 
Symbol 
ID4437283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp992121 
End bp992813 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content35% 
IMG OID639676710 
Productcapsular polysaccharide biosynthesis protein 
Protein accessionYP_820464 
Protein GI116627845 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID[TIGR01006] polysaccharide export protein, MPA1 family, Gram-positive type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.62909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG ATAACACTAA AAGTGTTGAA ATCGACGTAC TTGCACTATT GCAAAAACTT 
TGGACTAAAA AAGTATTTAT TCTATTTACA GCCTTTTATG TTGCTGTTTT CAGTTTCTTA
GGTACTTATT TCTTTATCCA ACCAACATAT ACATCAACAA CGCGTATCTA TGTTGTTAAT
CAGGCAACAG ATAATAATAA TCTTTCTGCT CAAGATTTGC AAGCTGGTGC CTTTTTGGTA
AAAGACTATA AAGAGATTAT TACATCAAAC GATGTCTTGT CAGAAGTTAT CAAAGATGAA
AAATTGAATA TGACAGAAGC AGAACTTGCT AAAATGATTT CAGTTGATAT TCCTACAGAT
ACTCGTCTTA TTTCAATCTC AGTAAAAGCC AAAACTGGTC AAGATGCTCA AGTGCTTGCT
AATAAAGTAC GTGAGGTGGC GTCTAAAAAA ATTAAAAATG TAACTAAAGT TGAAGATGTC
ACAACACTTG GAGAGGCTAA GTTGCCAGAG TCACCATCTT CACCAAATAT CAAACTTAAT
GTGCTTCTTG GGGCAGTGCT TGGAGCATTC CTTGCAGTGG TTGGTGTATT GGTACGTGAA
ATCCTAGATG ATCGTGTTCG TCGCCCTGAA GATGTTGAAG ATGTGCTTGG AATGACACTT
CTTGGAATTA TTCCTGATAC AGATAAAATT TAA
 
Protein sequence
MNQDNTKSVE IDVLALLQKL WTKKVFILFT AFYVAVFSFL GTYFFIQPTY TSTTRIYVVN 
QATDNNNLSA QDLQAGAFLV KDYKEIITSN DVLSEVIKDE KLNMTEAELA KMISVDIPTD
TRLISISVKA KTGQDAQVLA NKVREVASKK IKNVTKVEDV TTLGEAKLPE SPSSPNIKLN
VLLGAVLGAF LAVVGVLVRE ILDDRVRRPE DVEDVLGMTL LGIIPDTDKI