| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1050 |
|---|
| Symbol | |
|---|
| ID | 4438668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 975018 |
|---|
| End bp | 976154 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639676695 |
|---|
| Product | permease |
|---|
| Protein accession | YP_820449 |
|---|
| Protein GI | 116627830 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000509244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTA CAAAGAATCA GTTCATTTGG TTGGTTGTGC TGTTTTTCAG CTGTTTCTTG
ATATATACCT ATTGGGAAAC AGTTGTTTCG ATTTGTAACA AGATATTTGT TGCCAGTCAG
CCCTTCTTAT TTGGAGCGGG AATTGCCTTT GTGGTAAATA TCCTAATGTC TTTTTACGAA
AAAATACTGA TCAAGTTTAT ACCATTTGGT TTTATCACTA AAATTAAACG TCCCGTTTCC
CTGCTCTTGG CTTTTGCAAC TATCGGATTG ATCTTTACTT GGGTAGTATT CACTGTCCTT
CCTGATTTGA TTGACAGTAT CAACACCTTG ATTAGTCAAG ACCGCTCAGC TATTAATAAT
TTGATTAATT GGTTGCTTAA GAATAAATCT TTGCAGAAGA TCATTCAAGA CCTGGGTGGT
GTGACACAGG TTAGAGAGCT AATCAATAGC TACAGCGCAC AGTTGCTTCA ACAAATTATG
AATGGCTTGA CGAATTTCTT GACTTCTTTG ACTAGCCTAC CGTCAACTTT GATTAATCTT
TTTATCAGTA TTGTCTTTTC TTGCTATGTC TTGGTTGGGA AGGAGAAACT TGGTAGTCAG
GTTAATCGCT TAGTCGATGT TTATTTGGGT CGTTATGGTA AGACTTTCCA CTATGTGGTT
GCAATTCTCA ATAATCGTTT CCGCAATTTC TTTGTCTATC AGTCGATTGA AGCCTGCATT
TTGGGAACCT TATGTTATAT TGGGATGCGT ATCTTTAATT TCCCTTACGC TGCGACCATT
TCTATTCTGA TTGGCTTTTC AGCAATGATA CCAGTTTTGG GTGCCTATAT TGGTGTTACT
ATTGGTACCA TTTTGATTAT GACTCATTCC GTGACCTTGG CACTTTTATT TGTCGCCTAC
GTGGTTATTT TGCAACAGTT TGAAGGGAAT CTCATCTATC CTTATGTAGT TGGTGGTTCT
ACCGGACTTC CAGTCGTTTG GGTTATCTTG GCTATTACCA TAGGGTCTGC CTTAGGGGGA
ATCCTGGGTA TGCTGGTTTC CGTTCCAGTA GCCGCAACCC TTTATCAGAT TGTTAAGGAT
AATGTGGTTA CACGAGAAAA AGCCAAAGCA GTTGCTTCTT TAGAAAATAG TGATTAA
|
|---|
| Protein sequence | MKFTKNQFIW LVVLFFSCFL IYTYWETVVS ICNKIFVASQ PFLFGAGIAF VVNILMSFYE
KILIKFIPFG FITKIKRPVS LLLAFATIGL IFTWVVFTVL PDLIDSINTL ISQDRSAINN
LINWLLKNKS LQKIIQDLGG VTQVRELINS YSAQLLQQIM NGLTNFLTSL TSLPSTLINL
FISIVFSCYV LVGKEKLGSQ VNRLVDVYLG RYGKTFHYVV AILNNRFRNF FVYQSIEACI
LGTLCYIGMR IFNFPYAATI SILIGFSAMI PVLGAYIGVT IGTILIMTHS VTLALLFVAY
VVILQQFEGN LIYPYVVGGS TGLPVVWVIL AITIGSALGG ILGMLVSVPV AATLYQIVKD
NVVTREKAKA VASLENSD
|
|---|
| |