Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1042 |
Symbol | |
ID | 4438660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 967325 |
End bp | 968521 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639676689 |
Product | Co/Zn/Cd cation transporter |
Protein accession | YP_820443 |
Protein GI | 116627824 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0463512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGACGT ATGAAAATTT AAGGGTAGCC AGACGAGGTC CCATCGTTAG TATTGCAGCC TACTTACTTC TTACCATTGC CAAACTTATT GCTGGACATT TTTTAAACTC CAGCTCATTG ATTGCCGATG GTTTTAACAA CTTATCTGAT ATTTTGGGGA ATGTCACCCT ACTCATTGGA TTACAGCTGG CTAGTCAGCC AGCTGATTCA GATCATAGGT TTGGACATTG GAAGATTGAA GATTTATCAA GCTTAGTTAC TTCCTTTATC ATGTTTGTAG TAGGCTTCCA AGTCCTAATT CAAACAGTCC GAAAGATTTT TTTAAGAGAA GAAACTGTCG TCGATCCTCT TGGTGCTGCC GTCGGAGTCC TCTCTGCTAT TGTCATGTGT GCAGTCTATT TCTATAACAA AGGGTTAGCA AAAAAACTAA AATCCAGTGC CCTTATCGCA TCTGCTAAGG ACAACCTATC AGATGCCGTG ACCTCTATTG GAACTTCAAT TGCCATCGTC GCAGCATCCT TCAACCTTAC CATCATAGAC TATATTACTG CTATTATCAT CACCTTCTTC ATCCTAAAGA CAGCCTATGA TATCTTCATG GAAGCAACCT TCAGCTTGTC AGATGGCTTT GATGAGAGAA ATCTTAAGGC CTATGAAAAA GCCATTCTGA ACATTCCTAA AGTTACCAAA GTTAAAAAGC AACGCGGACG TTCCTATGGT AGTAATATCT ACCTTGATAT TGTGGTTGAA ATGAACCCTG ACCTCTCCGT CTACGAGAGC CACGCCATTA CGGAACAAAT TGAAGAAATC CTCAGTAAGC GTTTTTCTGT CTATGATACT GATGTCCATG TAGAGCCTGC TGCAATTCCT GAAGACGAAA TTTATGGGAA CGTCCTTCGC AAACTCATTC GGAATGAAAA GATTATCTTA TCAAAGATTC CAGGCTACGA AAACCTCTTA GCACCCGATT TCTTTTTGAT TGATGAAAAC GGCCATCATC AGAACCGGGA AGACGTCATT GCTAATCATC AACCGCTTCT CAATAACTTT GACAAGTTTA AGATGACATC CATCAGTCAA AAAACTAAAT TAATTAGTTA CGAACTGGGA GGAAATTTCC ATACCAGCAT CTGGCGCCGA AATGAGACAT GGTTTATGAT TTACCATCAA GTTACAGCTA TAAAAGATAA AGAGTAA
|
Protein sequence | MTTYENLRVA RRGPIVSIAA YLLLTIAKLI AGHFLNSSSL IADGFNNLSD ILGNVTLLIG LQLASQPADS DHRFGHWKIE DLSSLVTSFI MFVVGFQVLI QTVRKIFLRE ETVVDPLGAA VGVLSAIVMC AVYFYNKGLA KKLKSSALIA SAKDNLSDAV TSIGTSIAIV AASFNLTIID YITAIIITFF ILKTAYDIFM EATFSLSDGF DERNLKAYEK AILNIPKVTK VKKQRGRSYG SNIYLDIVVE MNPDLSVYES HAITEQIEEI LSKRFSVYDT DVHVEPAAIP EDEIYGNVLR KLIRNEKIIL SKIPGYENLL APDFFLIDEN GHHQNREDVI ANHQPLLNNF DKFKMTSISQ KTKLISYELG GNFHTSIWRR NETWFMIYHQ VTAIKDKE
|
| |