Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_1026 |
Symbol | |
ID | 4438597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 949703 |
End bp | 950458 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639676677 |
Product | ABC-type spermidine/putrescine transport system, ATPase component |
Protein accession | YP_820431 |
Protein GI | 116627812 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4604] ABC-type enterochelin transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0106643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAATA TAGATAAGGT GTCAAAATCC TATGGAAAAG ATCAAGTTCT TGATGAAGTT GGACTTTCTA TAGACAAAGG GAAATTTACA GCTTTTATTG GTCCAAATGG TGCTGGAAAA TCTACACTTT TGTCCTTGAT CAGTCGTCTC TTGCCTAAAG AAAAAGGCTA TCTTTATATT AAAGGACAAG AAATTGAGAG TTGGGACTCT TTGAACTTGG CAAAGGAACT TTCAATGTTA AAGCAAAAGG TTGATTATCA GGTGAAATTG ACTGTTGAAG AACTGATTTC CTTTGGCCGT TATCCATACA GTCAAGGGAG ATTATCAACT GAGGACTATC AAAAAATTGA TCAGGCAATT ACTTATATGA ACCTAGATAC TTTCCGAAAA AGACGCATTG ATCAGCTCTC TGGCGGTCAA TTACAGCGCG TCAATATTGC TATGATCCTT GCACAAGATA CGGATATTAT TCTATTGGAT GAACCTCTCA ATAATCTGGA CATCAAACAG GGAATTCTCA TGATGAAAAC TTTGAGAAGT TTGGTGGACG ATTTGGGAAA AACGGTCGTC GTTGTTATCC ATGATGTTAA TGTTGCCAGC CAGTTCGTTG ATGTCATGGT TGCTTTTAAA GATGGTAAAG TTTTTAGTCA CGGGAGTCCA GATCAGGTGA TGACTGAAGA TATCCTAGGC AGGCTTTATG ATATGAAAAT TACAATCGCA GATATCGATG GCAAGAAAAT CTGCTTATAT AGATAA
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Protein sequence | MINIDKVSKS YGKDQVLDEV GLSIDKGKFT AFIGPNGAGK STLLSLISRL LPKEKGYLYI KGQEIESWDS LNLAKELSML KQKVDYQVKL TVEELISFGR YPYSQGRLST EDYQKIDQAI TYMNLDTFRK RRIDQLSGGQ LQRVNIAMIL AQDTDIILLD EPLNNLDIKQ GILMMKTLRS LVDDLGKTVV VVIHDVNVAS QFVDVMVAFK DGKVFSHGSP DQVMTEDILG RLYDMKITIA DIDGKKICLY R
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