| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0980 |
|---|
| Symbol | |
|---|
| ID | 4438251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 904458 |
|---|
| End bp | 905153 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639676638 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_820392 |
|---|
| Protein GI | 116627773 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0327269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGAAA ATCGTCCTGT TATTGCCCTT GATTTCCCGA CTCTTGAGGA TGTGAAGGCT
TTCCTTGCTA AGTTTCCTGC TGATGAAAAG CTCTATGTGA AGATTGGTAT GGAACTTTAC
TATGCGGCTG GTCCTGAGAT TATACGCTAC GTTAAAGAGC TTGGCCATAG TATTTTCCTT
GACCTTAAGC TTCACGATAT TCCAAATACT GTCAAATCAG CTATGCGTGT CTTGTCTAAC
CTTGGCGTTG ATATGACAAA TGTGCATGCG GCTGGTGGCG TGGAGATGAT GAAAGCTGCG
CGTGAAGGCT TGGGAGATGG ACCAATCTTG ATTGCTGTAA CTCAGTTGAC CTCTACCTCT
GAAGAGCAGA TGCGTGATTT TCAAAATATC CAAACCACAC TTCAAGAATC AGTGGTTCAT
TATGCTCAGA AGACTGCTGA AGCAGGTCTC GATGGTGTTG TCTGTTCAGC ACACGAAGTA
CCCAAAATCA AAGAAGCAAC TAACCAAGAC TTCATTTGTT TGACACCTGG TATTCGTCCA
GCAGGAGCAG CGGTTGGTGA CCAAAAACGT GTTATGACTC CTGCTGATGC TCATCAAATT
GGTTCAGACT ACATTGTCGT TGGGCGCCCA ATTACGCAAG CTGAAGATCC AGTGGCAGCT
TATCACGACA TCAAGGCCCA ATGGAACGAT CAATAA
|
|---|
| Protein sequence | MRENRPVIAL DFPTLEDVKA FLAKFPADEK LYVKIGMELY YAAGPEIIRY VKELGHSIFL
DLKLHDIPNT VKSAMRVLSN LGVDMTNVHA AGGVEMMKAA REGLGDGPIL IAVTQLTSTS
EEQMRDFQNI QTTLQESVVH YAQKTAEAGL DGVVCSAHEV PKIKEATNQD FICLTPGIRP
AGAAVGDQKR VMTPADAHQI GSDYIVVGRP ITQAEDPVAA YHDIKAQWND Q
|
|---|
| |