| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0979 |
|---|
| Symbol | |
|---|
| ID | 4438250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 903661 |
|---|
| End bp | 904257 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639676637 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_820391 |
|---|
| Protein GI | 116627772 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02672] CRISPR-associated protein, Csm6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.547576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAAAA CTGCTCGAGA TTTTATTGAG AAGTTTGATT ATAAGGCGGC ACTAGATATT
CTAGACCAAT TATCAGATTT CCCGAATTTA AAAAGTCTTA GAGAAGAAAT CCGTGATGTT
GTCAACTGTC TGTCTAAAAA GAAAATCGCT TATATTCGTG AGAAACTATA CGATTTTTCA
CGAGTTTTCA AAAATCAGTC TATTCTTTCA GATATCCTAT CGTTTCCTCT CGATGACTCC
CAAGAGAAGG CTTTGAATTA CTATTTGATG ATTGATGTTT TAAAAGAACG TGAGCATATT
GCTGATGTCT TAATTAAGGC AAAATCACTA GCTGAATTTG TCATCGAAGA AACCATCAAA
AAAGATCATG AGGGCTTAAT TGTATTTGAT GGCAATCTGC CAAAACTTAA TCCAAGTTTT
CCTGATAAAG TTGCTCACGG TTTGTCAGAA ATTGATACGC GATTATTAAG TCGTAAGAAG
TTAAAACAAC TTTCTGAAAA CTTGCAATTG CTTCTTGTTG ATTGTTTGGG TATTGATTCA
AGCTATTTTA ACTACTATGA CAAACAAAAT AAAGAGCTTA CAAAGATGCT TGAATAG
|
|---|
| Protein sequence | MKKTARDFIE KFDYKAALDI LDQLSDFPNL KSLREEIRDV VNCLSKKKIA YIREKLYDFS
RVFKNQSILS DILSFPLDDS QEKALNYYLM IDVLKEREHI ADVLIKAKSL AEFVIEETIK
KDHEGLIVFD GNLPKLNPSF PDKVAHGLSE IDTRLLSRKK LKQLSENLQL LLVDCLGIDS
SYFNYYDKQN KELTKMLE
|
|---|
| |