| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0974 |
|---|
| Symbol | |
|---|
| ID | 4438245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 900443 |
|---|
| End bp | 900823 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639676632 |
|---|
| Product | CRISPR-system related protein |
|---|
| Protein accession | YP_820386 |
|---|
| Protein GI | 116627767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01870] CRISPR-associated protein, Csm2 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.699628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCT TGACTGATGA GAATTACGTT GATATTGCAG AAAAAGCAAT TCTAAAACTA
GAAAGAAATA CAAGGAACAG AAAGAATCCT GATGCCTTCT TTCTTACAAC AAGTAAGCTC
AGAAACTTGC TGAGCTTAAC TAGTACACTT TTTGATGAGA GTAAGGTCAA AGAATATGAT
GATCTCCTTG ATCGTATTGC TTATTTAAGA GTACAATTTG TCTATCAAGC AGGTAGAGAG
ATTGCAGTAA AAGATCTGAT AGAAAAGGCT CAAATTCTTG AGGCTCTTAA GGAAATCAAA
GATAGAGAGA CACTTCAAAG ATTTTGTAGA TATATGGAAG CATTAGTAGC CTATTTCAAG
TTTTATGGAG GTAAAGATTA A
|
|---|
| Protein sequence | MTILTDENYV DIAEKAILKL ERNTRNRKNP DAFFLTTSKL RNLLSLTSTL FDESKVKEYD
DLLDRIAYLR VQFVYQAGRE IAVKDLIEKA QILEALKEIK DRETLQRFCR YMEALVAYFK
FYGGKD
|
|---|
| |