| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0966 |
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| Symbol | |
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| ID | 4438237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 892939 |
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| End bp | 893487 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639676625 |
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| Product | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein |
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| Protein accession | YP_820379 |
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| Protein GI | 116627760 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family
[TIGR01383] DJ-1 family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000883438 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAAG TAGCAGTAGT ATTTGCGGAC GGATTTGAAG AAATCGAAGC CTTGAGCCCA
GTGGATGTCT TCCGCCGAGC TGGATTTGAC TGTAGCATGT TAGGACTTGA AAGTGCATCA
GTGACAGGCT CTCATGGGAT TCAAGTCACT ATGGATGGCG TATTTGATGG TAATCTAGAT
GAATATGATT TGGTGGTTCT CCCTGGCGGC ATGCCTGGCT CAACTAAACT ACGTGATCAC
CAAGCCTTGA TTGCCTCTCT TCAAGAAGTT GCTAAAGCTG GAAAATATGT TGCTGCCATT
TGTGCGGCAC CAATTGTTCT CGAACGTGCT GGTCTTCTTG AAGGTCGCAA ATTCACATGT
TTCCCTGGTG TTGAAGAACA AATTGCATCT GGTGACCATC AAACTGACTT AGTGGTCGTG
GATGACAATA TTGTGACTAG CCGTGGTGCC GGAACAGCAT TAGCGTTTGC TTATGCATTG
GTTGATTTGT TGGGCGGTGA TGGTCAGCAG TTGGCTCATA CTATGGTCTA TGACAGACTG
TTTCAATAA
|
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| Protein sequence | MTKVAVVFAD GFEEIEALSP VDVFRRAGFD CSMLGLESAS VTGSHGIQVT MDGVFDGNLD
EYDLVVLPGG MPGSTKLRDH QALIASLQEV AKAGKYVAAI CAAPIVLERA GLLEGRKFTC
FPGVEEQIAS GDHQTDLVVV DDNIVTSRGA GTALAFAYAL VDLLGGDGQQ LAHTMVYDRL
FQ
|
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