Gene STER_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0960 
Symbol 
ID4438269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp887224 
End bp888882 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content42% 
IMG OID639676619 
Productfibronectin-binding protein-like protein A 
Protein accessionYP_820373 
Protein GI116627754 
COG category[K] Transcription 
COG ID[COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTG ACGGCTTTTT TCTTCATCAT ATGACGGCCG AGTTACGTGA GCAGGTGCTT 
TACGGGCGTA TCCAGAAGGT TAATCAGCCT TTTGAGCGTG AATTGGTGTT GACCATTCGT
AACAATCGTC AGAATTACAA GCTTTTGCTT TCGGCTCACC CTGTCTTTGG GCGTATCCAG
ACAACCAAGG CAGAGTTGCC AAATCCTCAG AATCCAAACA CCTATACCAT GATTATGCGT
AAATACCTTC AGGGAGCTGT TATTGAGGAT ATCCAGCAGC TGGAAAATGA CCGTGTTCTT
GAGATTTCCG TGTCTAACAA AAACGAAATC GGTGACAGTG TTAAGGTTAC TCTTGTTATG
GAAATCATGG GGAAACACTC CAACATTATC CTTATTGACA AGAACGAGAA CAAAATCATA
GAGTCTATCA AGCACGTTGG TTTCTCGCAA AATAGTTACC GAACTATTTT GCCTGGCTCT
ACCTACATTG CTCCGCCAAA GACAGATGCT AGGAATCCTT TCGATATTTC AGACGAAAAT
CTCTTTGAAC TCTTACAGAC GGAGGATTTG TCAGCTAAAA ACCTTCAAAA ACTCTTCCAA
GGGTTGGGGC GTGATACGGC TAATGAATTA TCAGCTTTAT TAGAGACTGA TAAACTCAAG
AATTTTCGTG ACTTCTTTAA TCGTGGGGTC GAACCTAATC TTACGACTAA GGCATTTTCA
GCTGTAAGAT TCTCAGATAG TCAGGACCAA CCTGAGTTTG AGACCTTGTC AGAGCTTTTG
GACTACTACT ACTTGGACAA GGCGGCGCGT GACCGTGTGG CTCAACAGGC TAGTGATTTG
ATCCATCGTG TGCAAAATGA ACTGGAAAAA AACAAGAAGA AACTTGTTAA ACAAGAAAAA
GAGCTTGCTG CTACTGAAAA TGCTGAGGAG TTCCGTCAAA AAGGTGAACT TTTAACAACC
TTTCTGAGCA TGGTGCCAAA TGACAAGGAT AGTGTAGAAC TAGACAACTA CTATACTGGC
GAAAAGATTA CCATTCCTCT AAATGTGGCT CTAACGCCTA ACCAGAATGC TCAGCGTTAC
TTCAAGAAAT ACCAGAAACT CAAGGAAGCT GTTAAGCACT TAACTGGTTT AATTGAAGAA
ACCAAGCAAA CCATTAACTA TTTGGAAAGT GTCGAGTTCA GTCTTTCTCA AGCTAACATG
GATGAGATCG AAGACATTCG TGAGGAGCTT GTACAAGCTG GCTTTATGAG GCGTCGTTCA
ACTGACAAAC GTCAGAAACG CAAGAAACCT GAACGTTATC TAGCTTCTGA TGGCAAGACC
ATTATCATGG TTGGTCGTAA TAACCTACAA AACGAGGAGT TGACCTTCAA GATAGCTAAA
AAAGGTGAGC TCTGGTTCCA CGCCAAGGAT ATTCCAGGTA GTCACGTGGT CATCAAGGAC
AATCTTAACC CAACCGATGA GGTCAAGACT GATGCGGCAG AACTAGCTGC CTACTACTCT
AAGGCTCGTC TATCAAACTT GGTTCAAGTA GATATGATTG ATGTTAAGAA ACTCAACAAA
CCAACAGCAG GTAAGCCTGG ATTTGTGACT TATACGGGAC AAAAAACCTT ACGTGTCACA
CCAACTGAAG AAAAAATTGA CAGCATGCGA ATGAAATAA
 
Protein sequence
MSFDGFFLHH MTAELREQVL YGRIQKVNQP FERELVLTIR NNRQNYKLLL SAHPVFGRIQ 
TTKAELPNPQ NPNTYTMIMR KYLQGAVIED IQQLENDRVL EISVSNKNEI GDSVKVTLVM
EIMGKHSNII LIDKNENKII ESIKHVGFSQ NSYRTILPGS TYIAPPKTDA RNPFDISDEN
LFELLQTEDL SAKNLQKLFQ GLGRDTANEL SALLETDKLK NFRDFFNRGV EPNLTTKAFS
AVRFSDSQDQ PEFETLSELL DYYYLDKAAR DRVAQQASDL IHRVQNELEK NKKKLVKQEK
ELAATENAEE FRQKGELLTT FLSMVPNDKD SVELDNYYTG EKITIPLNVA LTPNQNAQRY
FKKYQKLKEA VKHLTGLIEE TKQTINYLES VEFSLSQANM DEIEDIREEL VQAGFMRRRS
TDKRQKRKKP ERYLASDGKT IIMVGRNNLQ NEELTFKIAK KGELWFHAKD IPGSHVVIKD
NLNPTDEVKT DAAELAAYYS KARLSNLVQV DMIDVKKLNK PTAGKPGFVT YTGQKTLRVT
PTEEKIDSMR MK