| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0852 |
|---|
| Symbol | |
|---|
| ID | 4436824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 785048 |
|---|
| End bp | 785638 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639676535 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_820289 |
|---|
| Protein GI | 116627670 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAA TGTATTATGC AGAGATGCCA GATGCGGCTC ACGATATTCA CGATCTTAAT
GTAGCACTCT TAGGTCAAGG TTTCCATTTT TATACTGATG CAGGTGTGTT TTCAAAAAAA
ATGGTGGATT ATGGTAGTCA GGTCTTGCTC AATGCTTTAG ATTTAGAAAG AGGAAAAAAC
CTACTTGACG TTGGTTGTGG CTATGGTCCA TTAGGAATTA GCCTAGCAAA GGTTCAAGGC
GTCCAATCGA CGATGATTGA TATAAATAGT AGGGCTATAG ATTTAGCTAA AAAAAATGCT
GAACGTAACG GAGTAGTCGC TCACATTTTC CAATCAAACA TCTATGAAAA TGTCTCAGAA
AAGTTTGATT ATATAATATC CAATCCACCA ATACGTGCAG GGAAAAAGGT AGTTCATGAA
ATTATCGAAG GGGCATTTGA TCACCTTAAT CAAGGTGGAA GTTTAACAAT TGTTATCCAG
AAGAAACAAG GAGCACCTTC TGCTAAAGTG AAGATGGAAA ATGTCTTTGG AAATGCGGAA
ATTATAAGAA AAGATAAGGG GTATTACATA CTTAGAAGCG AAAAGTTATG A
|
|---|
| Protein sequence | MSKMYYAEMP DAAHDIHDLN VALLGQGFHF YTDAGVFSKK MVDYGSQVLL NALDLERGKN
LLDVGCGYGP LGISLAKVQG VQSTMIDINS RAIDLAKKNA ERNGVVAHIF QSNIYENVSE
KFDYIISNPP IRAGKKVVHE IIEGAFDHLN QGGSLTIVIQ KKQGAPSAKV KMENVFGNAE
IIRKDKGYYI LRSEKL
|
|---|
| |