Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0848 |
Symbol | |
ID | 4436820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 781102 |
End bp | 781971 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639676531 |
Product | transposase |
Protein accession | YP_820285 |
Protein GI | 116627666 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.556417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAACCT TCCAAGCGAT TAAAGAATAT GCGGATGAAC AGAAAGAGGC TTCTATCAGC CACTTGTGCC GTATTCTAAA GGTATCTCGC TCAGGCTATT ACAAGTGGTT GCGTCATCAA GAAACTCCTT CTGAACAAGA AAATACAAGA TTGATAGACG TCATCAAGGC CCTTCATAGC CAACATAATG GCATTCTTGG TTATCGTCGT ATGACTCGAT TTGTCAATCG CAAGCTTGAA ACAAACTACA ATAAGAAGCG GATTCGTCGC TTGATGCATA TTCTAGGTAT TCGCTCCATT ATCAGAAGAT CCAAGGGGTA TTGCACCAAG ACTAGCTTTG TCAATGTAGA AGACAATATT CTCAATCGTG ATTTTACAGC TACTGCCCCC GATCAGAAAT GGTGTACAGA TGTGATGTTT TTGAAGTACG GTATCGGCTG TAAAGCCTAT TTGAGTGCGA TTAAGGACCT TTATGACGGC TCTATTGTCG CTTATGTGGT TGGTCAGTTT AATGATAATG AATTGGTATT CGAAACACTT CGTAAAGCCC GAAAAGCTAA TCCTGAGGCG ACACCATTGA TTCACAGCGA CCGAGGTTCA CAATATACTT CGAAAGATTA TTACCGTTTA ACGACCAAGT ATCAGATGAT CCGCTCCATG TCTCGTGTTG GTAAGTGTAT TGACAATGCA CCAATTGAGA GTTTCTTTGG GCACTTTAAG ACGGAGTGCT ATGATTTGAA GAAGTATAAG ACTTTTGAGG AGCTAGTTTC AGATATTGAT GCCTACATCT ATTTTTACAA TCATCAACGT TTTCAAGAGC GCAATAACGG CCTTGCCCCT CTTGAAATGA GGAACAAGGC CGTCGCCTAA
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Protein sequence | METFQAIKEY ADEQKEASIS HLCRILKVSR SGYYKWLRHQ ETPSEQENTR LIDVIKALHS QHNGILGYRR MTRFVNRKLE TNYNKKRIRR LMHILGIRSI IRRSKGYCTK TSFVNVEDNI LNRDFTATAP DQKWCTDVMF LKYGIGCKAY LSAIKDLYDG SIVAYVVGQF NDNELVFETL RKARKANPEA TPLIHSDRGS QYTSKDYYRL TTKYQMIRSM SRVGKCIDNA PIESFFGHFK TECYDLKKYK TFEELVSDID AYIYFYNHQR FQERNNGLAP LEMRNKAVA
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