| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0771 |
|---|
| Symbol | |
|---|
| ID | 4437316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 702438 |
|---|
| End bp | 704285 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639676464 |
|---|
| Product | GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A) |
|---|
| Protein accession | YP_820218 |
|---|
| Protein GI | 116627599 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU
[TIGR01394] GTP-binding protein TypA/BipA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0726544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAC TTAGAGAAGA CATCCGTAAC GTTGCCATTA TTGCCCACGT TGACCACGGA
AAAACAACAC TTGTAGATGA ATTGTTGAAA CAATCACACA CCCTTGATGA ACGTATGGAA
CTTGATGAGC GTGCATTGGA CTCAAACGAT CTTGAAAAAG AACGTGGTAT TACCATCCTT
GCTAAGAATA CAGCCGTTGC TTACAATGGT ACTCGTATTA ATATCATGGA CACACCTGGG
CACGCCGACT TTGGCGGAGA AGTTGAACGT ATCATGAAAA TGGTTGACGG TGTTGTTCTT
GTCGTCGATG CTTATGAAGG GACAATGCCT CAAACACGTT TTGTATTGAA AAAAGCTCTT
GAGCAAAATT TGACACCAAT TGTTGTTGTC AACAAGATTG ATAAACCCTC AGCTCGTCCT
GAAGAAGTTG TTGATGAAGT CCTAGAGCTA TTCATCGAAC TGGGTGCAGA TGATGATCAA
TTGGAATTCC CAGTTGTTTA TGCATCAGCT ATTAATGGAA CATCATCATT GTCTGATAAT
CCTGCCGATC AAGAGCACAC TATGGCTCCA ATCTTCGACA CTATTATAGA TCACATCCCA
GCTCCTGTAG ATAACTCAGA TGAGCCACTT CAATTCCAAG TGTCACTTCT TGACTACAAC
GACTTTGTTG GACGTATTGG TATTGGACGT ATCTTTCGTG GGACTGTAAA AGTTGGTGAC
CAAGTTACTC TTTCAAAACT TGATGGAACA ACTAAAAACT TCCGTGTTAC GAAACTCTTT
GGTTTCTTTG GCTTGGAGCG TCGTGAAATT GAAGAAGCCA AGGCTGGTGA CTTGATTGCT
ATCTCGGGTA TGGAGGATAT CTTCGTCGGT GAAACAATCA CACCAACTGA TGCTGTTGAA
CCATTACCAG TTCTTCATAT TGATGAACCA ACACTTCAAA TGACTTTCTT GGCGAATAAC
TCACCATTTG CTGGTCGCGA AGGTAAACAC GTGACATCAC GTAAAGTCGA AGAGCGTCTT
TTGGCTGAGT TGCAAACAGA CGTTTCACTA CGTGTTGAAC CAACTGATTC ACCAGATAAA
TGGACTGTCT CAGGCCGTGG TGAATTGCAC TTGTCAATCC TTATCGAAAC AATGCGTCGT
GAAGGATATG AACTTCAAGT GTCACGTCCA GAAGTTATCA TCAAGGAAAT TGATGGAGTG
AAATGCGAAC CATTTGAACG TGTTCAAATT GATACTCCAG AGGAGTACCA AGGCTCAATC
ATCCAAGCTC TTTCAGAACG TAAAGGTGAC ATGCTTGATA TGCAAATGGT TGGTAACGGC
CAAACACGCC TTATCTTCCT TGTGCCAGCT CGTGGACTTA TCGGATTCTC TACTGAATTC
TTGTCTATGA CACGTGGTTA CGGTATTATG AACCATACCT TTGATCAATA TTTGCCGGTT
GTTCCTGGTG AGATTGGCGG ACGTCACCGT GGTGCTCTCG TTTCTATCGA TACAGGTAAA
GCGACAACTT ACTCAATTAT GCGTATTGAA GAACGTGGTA CTATCTTTGT TAACCCAGGT
ACTGAAGTTT ATGAAGGTAT GATTGTCGGT GAGAATGCTC GTGAAAATGA CCTTGGTGTT
AACATTACTA CAGCAAAACA AATGACAAAC GTGCGTTCAG CTACTAAGGA CCAGACGGCT
GTTATCAAGA CTCCACGTAT ATTGACACTT GAGGAATCAC TTGAATTCTT GGATGATGAT
GAATACATGG AAGTAACACC TAAATCTATC CGCTTGCGTA AACAAATTTT GAATAAAGCA
GAGCGTGATA AAGCTAATAA ACGTAAGAAA AAAAGCAGCG AAAGCTGA
|
|---|
| Protein sequence | MTKLREDIRN VAIIAHVDHG KTTLVDELLK QSHTLDERME LDERALDSND LEKERGITIL
AKNTAVAYNG TRINIMDTPG HADFGGEVER IMKMVDGVVL VVDAYEGTMP QTRFVLKKAL
EQNLTPIVVV NKIDKPSARP EEVVDEVLEL FIELGADDDQ LEFPVVYASA INGTSSLSDN
PADQEHTMAP IFDTIIDHIP APVDNSDEPL QFQVSLLDYN DFVGRIGIGR IFRGTVKVGD
QVTLSKLDGT TKNFRVTKLF GFFGLERREI EEAKAGDLIA ISGMEDIFVG ETITPTDAVE
PLPVLHIDEP TLQMTFLANN SPFAGREGKH VTSRKVEERL LAELQTDVSL RVEPTDSPDK
WTVSGRGELH LSILIETMRR EGYELQVSRP EVIIKEIDGV KCEPFERVQI DTPEEYQGSI
IQALSERKGD MLDMQMVGNG QTRLIFLVPA RGLIGFSTEF LSMTRGYGIM NHTFDQYLPV
VPGEIGGRHR GALVSIDTGK ATTYSIMRIE ERGTIFVNPG TEVYEGMIVG ENARENDLGV
NITTAKQMTN VRSATKDQTA VIKTPRILTL EESLEFLDDD EYMEVTPKSI RLRKQILNKA
ERDKANKRKK KSSES
|
|---|
| |