Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0700 |
Symbol | |
ID | 4437382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | - |
Start bp | 636658 |
End bp | 637722 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639676400 |
Product | acyl-CoA dehydrogenase family protein |
Protein accession | YP_820154 |
Protein GI | 116627535 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.564675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCACGTT TTTCAAAAGA ATTCCTTACT TGGTTGGACA CCAACGCTGA CCATATTGAC CAAGAGTCTG GACCAATTGC GGACCAACTT CTTGAAAAAA TTGCTGAAAA CGACGTCTTT AAGATCGGCG TACCTGCTGA GTTTAATGGC CTAGGTGGTG GTCCTACTCA CGTTGTTGAT GTGCTTAATG AATTGGCACA ACACTCTTTG ACAGCTTCCT TTATTTCTTG GGGACACCGT ACTTTCATCG AGTATATCTT AGCTAGCGAC AATGCTTACC CTCGTGAAAC ATGGTTGAAA GAATTATATA CCGGTGAGCG TGCTGGTGGT ACCGGTTTGT CTAACGCCGT CAAATTCTTA TCTGATATTG AAGAATTGAA TGTTACTATC AGCCAAGAAG GTGATGACTA CTATCTTGAT GGTCGTTTGC CTTGGGTAAC TAACCTTCGT TCTGATAAAT TCGCTGCTCT CTTTGCTGCT GACTTTAAAG ACGGTAGCCA ACCTTGGATT ATCACCATTC CATCTGAAGC TGAAGGCCTC AGCCGTTCTG AAGATTTGGA ATTTGTTTCC CTTCAAGGTG CTAACACTGC CTCTCTTACT TTTGATCACG TTAAGTTAGA TCCTAATTGG GTCCTTTCAA AAGAAGGTGC AGACTATATT GCCAAAACAC GTCCGAACTT CCTTGGTTTC CAATTTGGTC TTGCCTTTGG TTTGGCACAA CGTTCTCTTG ATGAGGTTGA AGCTAGTCTA AACAGTAACC GTAGCGTTCT TCGTGAGGAA TTTGAAGCAA CACGTGGAAA TCTTCTTGCT ATTCAAGACC AACTCTTTGC GGGTCTTAAT GATGCTAATT ATTTCATTGA AAAACCACGT GAACTTTTCC AATTGCGTAT CGATATTGTC GACGTCGTAG CCAACAGCCT GCTCCTCGAA CTTCAGGCTA GTGGTGGTCG TGGCTATTTG AAAGAATCAG AGTCAAGCTT TATCCGTCGT TGGAATGAAG GCGTCTTCCT TCCAATTGTA TCTCCGAGTG CGGTACAGCT TCGTCACATT CTTGCAGCTA GCTAG
|
Protein sequence | MSRFSKEFLT WLDTNADHID QESGPIADQL LEKIAENDVF KIGVPAEFNG LGGGPTHVVD VLNELAQHSL TASFISWGHR TFIEYILASD NAYPRETWLK ELYTGERAGG TGLSNAVKFL SDIEELNVTI SQEGDDYYLD GRLPWVTNLR SDKFAALFAA DFKDGSQPWI ITIPSEAEGL SRSEDLEFVS LQGANTASLT FDHVKLDPNW VLSKEGADYI AKTRPNFLGF QFGLAFGLAQ RSLDEVEASL NSNRSVLREE FEATRGNLLA IQDQLFAGLN DANYFIEKPR ELFQLRIDIV DVVANSLLLE LQASGGRGYL KESESSFIRR WNEGVFLPIV SPSAVQLRHI LAAS
|
| |