Gene STER_0688 details

Gene Information

• Locus tag: STER_0688
• Symbol: aroD
• ID: 4437271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus thermophilus LMD-9
• Kingdom: Bacteria
• Replicon accession: NC_008532
• Strand: +
• Start bp: 625323
• End bp: 626000
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 639676388
• Product: 3-dehydroquinate dehydratase
• Protein accession: YP_820142
• Protein GI: 116627523
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0710] 3-dehydroquinate dehydratase
• TIGRFAM ID: [TIGR01093] 3-dehydroquinate dehydratase, type I

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.952141
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTG TAGTTCCGAT TATGCCGACT AGTTTAGAGG AAGCACAAGC GCTTGAGCTG 
TCTCGTTTTG AGGGGGCAGA CATTATTGAA TGGCGTGCAG ATTTTTTAGA TAAGCATAGT 
ATCTTAACAG TTGCTCCAGC TATTTTTGAG AAATTCGCAG GCTTTGAAAT TGTTTTTACC 
ATTCGTACGA CACGTGAAGG TGGTAAGATT GAGTTAACTG ATGGGGAATA TGTCACACTG 
ATTAAGGATG TAGCTGCTAT CTATTCACCA GATTATATTG ATTTTGAGTA TTTCACACGC 
AAGGAAGTCT TTGACCAGAT GCTTGAATTT TCAAACTTGG TTTTGTCTTA TCATAACTTT 
GAGGAGACAC CTGAAAACCT TATGGAACTT TTATCTGAGA TGACCAACTT GACGCCAAGA 
GTTGTTAAAG TAGCCGTTAT GCCTAAGAAT GAACAAGATG TCCTTGATCT TATGAATTTC 
ACACGCGGCT TTAAGGCCTT TAACCCTGAA CAAGAGTTTG TAACTATGTC AATGGGTAAG 
TTAGGTCGTT TGTCACGTTT GGCGGGAGAC TTGGTGGGGT CATCATGGAC TTTTGCTAGT 
CTTGACAATA CCAGCGCACC GGGTCAAGTT GCTCTTGCGG ATATGTGTAG GATTAGGGAG 
GTTTTGGATG CGGATTGA 

 

Protein sequence

MKIVVPIMPT SLEEAQALEL SRFEGADIIE WRADFLDKHS ILTVAPAIFE KFAGFEIVFT 
IRTTREGGKI ELTDGEYVTL IKDVAAIYSP DYIDFEYFTR KEVFDQMLEF SNLVLSYHNF 
EETPENLMEL LSEMTNLTPR VVKVAVMPKN EQDVLDLMNF TRGFKAFNPE QEFVTMSMGK 
LGRLSRLAGD LVGSSWTFAS LDNTSAPGQV ALADMCRIRE VLDAD