| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0674 |
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| Symbol | |
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| ID | 4437257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 609678 |
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| End bp | 612131 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639676375 |
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| Product | exoribonuclease R |
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| Protein accession | YP_820129 |
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| Protein GI | 116627510 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAT CTATTATAAA TTATTTGAAA GAGCATGGGA AATCCAGTGT AAATGACATT
GCCCACGCTC TTAATCACGC TGGCGGTGAA AAGTTCCCAC AGCTTATCAA AGTCATATCA
GCTATGGAAA GGAAGAGACA GTTGCGCTTT AATCGAGACG GCTCTGTATC CTTACGTCCT
AAGAAAGAAT ATCCCAATCA GGTTACTGTA GAGGGTGTTT TTCATGCCAA TAAGAATGGT
TTTGGTTTCT TACATGTCGA TGACAGTGAG GATGACATGT TTATTGGTCG TAATGACGTT
GGCCATGCCA TTGATGGTGA CACTGTTTCC GCAGTTATTA AGAAGCCAGC AGATCGTTTG
CGTGGGACAA TGGCTGAAGC GAGAGTTGTT GAAATTGTCG AACGCTCTCT TAAAACGGTT
GTCGGGAAAT TTATCCTCAA TGACGAGAAA GAACCTTATG TAGGTTACAT TAAGTCTAAG
AATCAAAAAA TTCAGCAACC AATCTATATC AAGAAAGGAC CAGTTGCTCT TGAGGGGACT
GAGATTATTA AGGTTGATAT TGAAAAATAC CCTAACCGCC ATCACGATTA TTTTGTAGGA
AGTGTTCGAG ATATTATTGG TCATCAAGGA GATGCTGGTA TTGATGTCTT GGAAGTTTTG
GAATCAATGG ATATTGTTTC GGAGTTTCCA GAAGATGTTA TGGCTGAAGC AGAGGCTGTG
CCGGATGTAC CTAGTCAAGA AGATCTAATT GGTCGTGTTG ACCTTCGTCA AGAAGTGACC
TTCACCATTG ATGGAGCTGA TGCCAAGGAC TTGGATGATG CAGTTCATAT TAAACGTTTA
CCAAATGGTA ACTATGAGCT AGGTGTCCAC ATTGCAGATG TGTCTTATTA TGTCACAGAG
GGTTCTGCCC TCAACCGTGA GGCTGCAGCG CGTGGGACTT CTGTTTGTGT GACAGACCGC
GTGGTTCCAA TGTTGCCTGA GCGTCTTTCA AATGGTATTT GTTCTCTAAA TCCCAATGTT
GACCGCTTGA CTCTGTCAGC TATTATGGAG ATTACTCCAA AAGGCAAGGT GATTAATCAT
AAGATTTGCC AATCTGTAAT TAAGACAACC TTCCGTATGA CCTATAGTGA TGTCAATGAA
ATGTTGGCTG GAAATCCAGA AAAGATTGAA CAGTTTAAGC CTATCATGGA TTCTGTGTCA
GCTATGGCAG AACTTCATAA GATTTTAGAA GATATGCGCG AACGTCGTGG TGCCCTTAAC
TTTGATACAT CTGAAGCTCG TATCTTGGTT AATGATAAGG GAATGCCAGT TGATATCGTG
GTGCGTGAAC GTGGGACGGC TGAGCGAATG ATTGAGTCCT TTATGTTGGC TGCCAATGAA
TGTGTGGCAG AGCATTTCGC TAAGGCTAAG TTGCCATTTA TTTACCGTAT TCACGAAGAG
CCTAAAGCGG AGAAATTGCA ACGCTTTATG GATTATGCTT CTATCTTTGG TATTCAAATC
AAAGGAACAG CTAATAAGAT GGATCAGCTA GACTTACAAG ATTTCATGGC GCGAGTTCAA
GGCAAACCTG GAGCAGAAGT CATGAATATG ATGTTGCTTC GTTCAATGCA ACAAGCTCGT
TATTCAGAAC ACAATCATGG GCACTATGGA CTTGCGGCTC AGTACTATAC TCACTTCACC
AGTCCGATCC GTCGTTACCC AGACCTTTTG GTTCACCGAA TGATTCGTGA GTACACCAAC
AATATGTCTC AAGAAACGCG TGAACACTTT GAAGAGGTTA TTCCAGAGTT AGCTACTTCA
TCTTCAACCC TTGAGCGTCG TGCTATTGAC GCTGAACGTG TCGTTGAAGC CATGAAAAAA
GCAGAGTACA TGGAAGAGTT TGTTGGTCAA GAATTCGATG GTATTGTCGG AAGTGTGGTT
AAATTCGGTA TGTTTGTGGA ATTGCCAAAT ACCGTTGAAG GTTTGGTTCA TATCACAACA
CTTCCAGAAT TCTACAATTA CAATGAACGC ACCATGACCC TTCAGGGTGA AAAATCTGGT
AAGACTTTCC GTGTTGGCCA ACCTATTCGA GTTAAGTTAA TTCGTGCAGA TAAGGAGACT
GGAGACATTG ATTTCCAATA CCTTCCAAGT GAGTACGATA TCACTGAAAA AGTAGATCAC
AAGGCTCGTC AGGAACGTGA AGAGAAGGCT AAGTCCTTCC GTAATAGAGG ACCACGCCGC
GATCGTCAGA ATGGTGATTT CGAAAGTCGT GGTAAACGTG TAAATAAGCG TAGCGGTCAA
GATAGTAGTG GTTACAAAGG CTCTTATGAT GAAAAGCGTA AGTCATCTAA GAAACCAGAC
AAGCGTAAGA ATCAAAACCG TCCTCATAAT GATAATAAGG GACGTGAGAG TGGTCGTCGT
AAGAAAAAAG AAAACAAACC TTTCTACAAG GACGTTGCTA AAAAACGAAA ATAG
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| Protein sequence | MKESIINYLK EHGKSSVNDI AHALNHAGGE KFPQLIKVIS AMERKRQLRF NRDGSVSLRP
KKEYPNQVTV EGVFHANKNG FGFLHVDDSE DDMFIGRNDV GHAIDGDTVS AVIKKPADRL
RGTMAEARVV EIVERSLKTV VGKFILNDEK EPYVGYIKSK NQKIQQPIYI KKGPVALEGT
EIIKVDIEKY PNRHHDYFVG SVRDIIGHQG DAGIDVLEVL ESMDIVSEFP EDVMAEAEAV
PDVPSQEDLI GRVDLRQEVT FTIDGADAKD LDDAVHIKRL PNGNYELGVH IADVSYYVTE
GSALNREAAA RGTSVCVTDR VVPMLPERLS NGICSLNPNV DRLTLSAIME ITPKGKVINH
KICQSVIKTT FRMTYSDVNE MLAGNPEKIE QFKPIMDSVS AMAELHKILE DMRERRGALN
FDTSEARILV NDKGMPVDIV VRERGTAERM IESFMLAANE CVAEHFAKAK LPFIYRIHEE
PKAEKLQRFM DYASIFGIQI KGTANKMDQL DLQDFMARVQ GKPGAEVMNM MLLRSMQQAR
YSEHNHGHYG LAAQYYTHFT SPIRRYPDLL VHRMIREYTN NMSQETREHF EEVIPELATS
SSTLERRAID AERVVEAMKK AEYMEEFVGQ EFDGIVGSVV KFGMFVELPN TVEGLVHITT
LPEFYNYNER TMTLQGEKSG KTFRVGQPIR VKLIRADKET GDIDFQYLPS EYDITEKVDH
KARQEREEKA KSFRNRGPRR DRQNGDFESR GKRVNKRSGQ DSSGYKGSYD EKRKSSKKPD
KRKNQNRPHN DNKGRESGRR KKKENKPFYK DVAKKRK
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