| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0618 |
|---|
| Symbol | |
|---|
| ID | 4437081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 561258 |
|---|
| End bp | 561935 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639676325 |
|---|
| Product | hemolysin III-like protein |
|---|
| Protein accession | YP_820082 |
|---|
| Protein GI | 116627463 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
|---|
| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.160524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATA CTGCTACTTT TAACACTTCT CAAAACCTCA AACTCAGTAA AAAACTTAGC
TTTGGTGAGG AAGTGGCAAA CAGCGTGACA CACGCTGTCG GCGCCATTGC CATGCTGGTC
TTATTGCCAA TTACTGCCGT TCATGCTAAC AACGGCTACG GCATGACTGC TGCTGTCGGT
ATGTCCGTTT TTGTCATCAG CCTCTTCCTC ATGTTCTTGA GCTCAGCTAT CTATCATGCT
ATGGATTACA ACTCACCTCA CAAGATGGTT TTGAGAATTA TTGATCACAG TATGATTTAT
ATCGCCATTG CTGGAAGCTA CACCCCTGTT GCACTCTCAC TGGTTGGCGG ATGGCTAGGC
TATAGCATCA TCATCCTCCA ATGGGGAACA ACGATTTTTG GGATTCTCTA TAAAATCTTT
GCTAAAAAAA TCAATGAAAA ATTCTCCCTC TTCCTCTATC TGATGATGGG ATGGTTGGTT
ATCTTCATTA TTCCAGCTAT CGTCACTAAG ACAGGGCCTG CCTTTTGGGG ACTCATGCTT
GCTGGAGGGT TGTCATACAC GGTTGGGGCA GCTTTTTATG CTAAGAAAAA AACATACTTC
CACATGATTT GGCACCTCTT CATCATGCTG GCTTCAACTC TCCAATATAT GGGGATTGTC
TACTTCATGC TTCCTTAA
|
|---|
| Protein sequence | MSNTATFNTS QNLKLSKKLS FGEEVANSVT HAVGAIAMLV LLPITAVHAN NGYGMTAAVG
MSVFVISLFL MFLSSAIYHA MDYNSPHKMV LRIIDHSMIY IAIAGSYTPV ALSLVGGWLG
YSIIILQWGT TIFGILYKIF AKKINEKFSL FLYLMMGWLV IFIIPAIVTK TGPAFWGLML
AGGLSYTVGA AFYAKKKTYF HMIWHLFIML ASTLQYMGIV YFMLP
|
|---|
| |