| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0593 |
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| Symbol | |
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| ID | 4436766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 538524 |
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| End bp | 539243 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639676301 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_820058 |
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| Protein GI | 116627439 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000243633 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTTTAG ATAAATTATT AGGACAGTCG GGCTATGGTT CTCGCAATCA GGTCAAGAAT
CTCATTCGTA GTCGTCAGGT ATATGTAGAT GGTGTCCTGG CGGATCGAGA TAATCTTAAT
GTGGATGCTA GTCTTCAAAC CATCATGGTT TCTGGTAAGG AACTGGAGCA TGCGCCAGAA
GTCTACTACC TTATGAATAA GCCGTCAGGA GTGGTGTCAG CTAGAAAGGA CAAGGAACAC
CAAACAGTTA TTGATTTGAT TAGGCCTGAG GATCAGCGAG AGGGCCTTTA TCCTGTGGGA
CGTTTGGATA GAGATACGGA AGGTTTGGTG TTGATTACCA ATAATGGTCC CTTGGGCTTT
GCCATGCTTC ACCCACGCTA TCATGTGGCT AAGACATATT ATGTTGAGGT TAATGATATT
CTGGGGCCTG ATGCACCTGC ATTTTTTGAG TCTGGTGTAG TTTTTGAAGA TGGTACTGTT
TGTCAATCAG CTCAGCTGGA AATTTTAAGT TCTGCGAGTG ACAAGAGCTG TGCTCGAATT
ACGATTTCGG AAGGTAAGTT TCATCAAGTA AAAAAGATGT TTTTGGCTTA TGGGGTCAAG
GTGACCTATC TCAAGCGTAT CTCTTTCGGA GAGTTTAAAC TTGATGAAGG GATGGCAGTA
GGTTCCTACC GAACCTTGAC TGAAGCGGAA AAAACAATCT TGCGTACTTA TTTGGGTTAG
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| Protein sequence | MRLDKLLGQS GYGSRNQVKN LIRSRQVYVD GVLADRDNLN VDASLQTIMV SGKELEHAPE
VYYLMNKPSG VVSARKDKEH QTVIDLIRPE DQREGLYPVG RLDRDTEGLV LITNNGPLGF
AMLHPRYHVA KTYYVEVNDI LGPDAPAFFE SGVVFEDGTV CQSAQLEILS SASDKSCARI
TISEGKFHQV KKMFLAYGVK VTYLKRISFG EFKLDEGMAV GSYRTLTEAE KTILRTYLG
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