| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0578 |
|---|
| Symbol | |
|---|
| ID | 4436751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 523971 |
|---|
| End bp | 525707 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639676287 |
|---|
| Product | ABC-type multidrug transport system, ATPase and permease component |
|---|
| Protein accession | YP_820044 |
|---|
| Protein GI | 116627425 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATA TTTGGTCTTA TCTCAGACGT TATCCTAAGT GGCTAGCAAT GAATTTTACG
GCAGCCATTT TATTTGTTAT TGCTAACTTG GGCTTGCCGA CTGTTCTTGC CAGAATGATT
GATGAGGGAA TAAACCGTGG TGATGTTGAT AAGCTTTACG CTTATGCTTG GGTCATGTTT
GGTGTAGTTT TGACTGGGAT TGTTGGTCGT ATACTTCTGT CCTATGCGGT TGGTAAGTTG
ACCACTACTA TGGTGCAAGT CATGCGTAAT GACATTTATG ATAAGCTTCA GGAGTATTCT
CACCACGAGT ATGAGCAGAT AGGGGTATCC TCTTTGGTGA CTCGTATCAC GTCAGATGCT
TTTGTGCTTA TGCAGTTTGC GGATCAGGTT CTTAAGCTAG GGGTTATCAC TCCTTTGATG
ATGGTTTCCA GTGTCTTCTT GATTTTGACG ACAAGTCCAT CTTTGGCTTG GATTGTGGCA
ATCTCCTTGC CTTTCCTAGC CGTAGTTGTC TGGTATGTGG CGGTAAAAAC GCGTCCGCTT
TCTGAAAAAC AACAGGCAAC TCTCGACAAG ATTAACCAGT ATGCTCGTGA AAATCTGACT
GGACTTCGTG TCATCCGAGC TTTCGCTAGA GAAGATTTTC AAGAGAAGAA GTTCGCTTCT
GAAAATGCTG TCTATGCGGA TAATTCAAGC AAACTTTTCA AATTGACTGG TTTGACCGAG
CCACTTTTTG TACAAATCAT TATCGCTATG ATTGTGGCTA TTGTTTGGTT TGCTCTTGAG
CCATTAGGTT CTGGGACTTT AGCAATCGGT GACTTGGTTG CCTTTATTGA GTACAGCTTT
CATGCACTAT TGTCCTTCCT TTTCCTAGCC AATCTCTTTA CCATGTATCC TCGTACGGCG
GTGTCTAGTG AACGTCTGCA GGAAATTATG GACATGCCGA TTTCTATCAA TCCAAATGAA
GATGGCGTGA CAGAAACCGA GACTAGGGGA TATTTGGAAT TTGACAATGT GACCTTTGCC
TATCCCGGTG AAACTGAAAG TCCTGTCCTA CACAACATTT CTTTCAAGGC TAGACCAGGT
GAAACCATTG CCTTTATCGG ATCTACGGGT TCAGGAAAAT CATCACTTGT ACAGTTGATT
CCACGCTTTT ATGATGTAAC ACTTGGACGC ATTCTTGTTG ATGGTGTAGA TGTCCGTGAC
TACAATCTTA AGGCTCTTCG TCGTAAGATT GGCTTTATCC CACAAAAAGC CCTACTCTTT
ACAGGGACTA TCGGTGAAAA TATCCGTTAT GGTAAGGAAA ATGCCAGTCA TGAAGAATTG
AATCAAGCCA CTGATGTGGC TCAAGCCAAG GAATTTATCG AAAGTAAGGA AGAACGCTAT
GATTCTCACT TGGCTGAGGG TGGTAGCAAC CTTTCTGGTG GACAGAAGCA GCGTTTGTCA
ATTGCACGTG CTGTGGTTAA ACGTCCTGAC CTTTACATCT TTGATGATTC CTTCTCTGCC
TTGGACTACA AGACTGATGC GACCTTGCGC CGTCGTCTAA AAGAAGTGAC CCAGGATGCG
ACAGTCTTGA TTGTGGCTCA ACGTGTGGGA ACCATTATGG ATGCAGATCA GATTATCGTT
CTTGATAAGG GTGAAATTGT TGGTCGTGGC CGTCACGAAG AGCTCATGGA AAGTAATGAG
ATTTACCGTG AGATTGCTAA TTCACAATTT AATCAAAAGA GTCTTACGGA AGACTAG
|
|---|
| Protein sequence | MAYIWSYLRR YPKWLAMNFT AAILFVIANL GLPTVLARMI DEGINRGDVD KLYAYAWVMF
GVVLTGIVGR ILLSYAVGKL TTTMVQVMRN DIYDKLQEYS HHEYEQIGVS SLVTRITSDA
FVLMQFADQV LKLGVITPLM MVSSVFLILT TSPSLAWIVA ISLPFLAVVV WYVAVKTRPL
SEKQQATLDK INQYARENLT GLRVIRAFAR EDFQEKKFAS ENAVYADNSS KLFKLTGLTE
PLFVQIIIAM IVAIVWFALE PLGSGTLAIG DLVAFIEYSF HALLSFLFLA NLFTMYPRTA
VSSERLQEIM DMPISINPNE DGVTETETRG YLEFDNVTFA YPGETESPVL HNISFKARPG
ETIAFIGSTG SGKSSLVQLI PRFYDVTLGR ILVDGVDVRD YNLKALRRKI GFIPQKALLF
TGTIGENIRY GKENASHEEL NQATDVAQAK EFIESKEERY DSHLAEGGSN LSGGQKQRLS
IARAVVKRPD LYIFDDSFSA LDYKTDATLR RRLKEVTQDA TVLIVAQRVG TIMDADQIIV
LDKGEIVGRG RHEELMESNE IYREIANSQF NQKSLTED
|
|---|
| |